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Name : secD (PAJ_0291) Accession : YP_005933167.1 Strain : Pantoea ananatis AJ13355 Genome accession: NC_017531 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 358790 - 360604 bp Length : 1815 bp Strand : + Note : similar to Pantoea sp. At-9b, protein-export membrane protein SecD (NCBI: ZP_05727453.1) COG: intracellular trafficking, secretion, and vesicular transport subcellular localization as predicted by Psort 2.0: inner membrane DNA sequence : ATGCTGGTCGTGGTGCTTGTCATTGGCCTGGTGTATGCACTTCCCAACCTTTATGGTGAGGATCCGGCTGTTCAGATCAC TGGCGCGCGCGGAAGCGCCGCCAGTGAGCAAACGTTGGATCAAATTCAGAACGTATTAAAACAAGACAATATTCAAAGTA AGTCTGTTGCGCTGGAAAATGGCGCGATTACCGCGCGTTTTGCCAATACGGATGTGCAACTGCGTGCCCGCGAAGCGATC ATGAAAGCGCTGGGCGAAAACTATGTGGTCGCGCTTAACCTTGCACCGGCCACGCCGCGCTGGCTGACGCTGCTGGCGGC ACAGCCCATGAAGCTTGGCCTCGATCTGCGTGGTGGTGTGCACTTCCTGATGGAAGTGGATATGGACACTGCCCTGAGCA AACTGCAAGAGCAGAATGCTGACAGCCTGCGCAGCGACCTGCGCGAAAAGAATATCCCTTATACCAACGTCAACAAGATT GCTAACTACGGCGTGGAAATTCGTTTCCGTGACGCAGCCAGCCGCGATGCTGCGGTTAAGTGGCTATCCTCGCGTCATCA GGATCTCGTCATTAACAGCAGTGGCGATGATGCACTGCGCGCCACCATGACCGATGCCCGCCTCAGCGAAGCACGTGAAT ATGCGGTTCAGCAGAACATTACTATCCTGCGTAACCGTGTAAACCAACTGGGTGTTGCAGAACCGCTGGTACAGCGTCAG GGTTCTGACCGCATCGTGGTTGAACTGCCAGGTATTCAGGACACCGCGCGCGCCAAAGAAATTTTAGGTGCGACGGCGAC GCTGGAATTCCGTCTGGTTAACACCAGCGTGGATCCTACCGCCGCCGCCAGCGGCCGTGTACCGGGTGATTCTGAAGTGA AAGACATGCGTGATGGACGCCCTGTGGTGCTCTATAAACGCGTGATCCTGACCGGTGACCACATTACCGATTCCACATCC AGCATGGATGAGTACAACCAGCCTCAGGTGAACATTTCACTGGACGGCGCGGGCGGTAATATCATGTCTAACTTCACCAA GGACAACATCGGTAAGCCGATGGCGACCCTGTTTGTGGAGTACAAAGACAGCGGCAAGAAAGATGCTAACGGTCGTGCCA TTCTGGTGAAACAGGAAGAGGTGATCAACGTCGCCAATATCCAGTCTCGCCTGGGTAACAGCTTCCGCATCACCGGTATC AGCAACCCGAACGAAGCACGTCAGCTGTCGCTCCTGCTGCGTGCCGGTGCGCTGATTGCGCCTATCCAGATTGTGGAAGA GCGGACTATTGGTCCAACGATGGGGCAGCAGAACATTACTCAGGGTCTGGAAGCCTGCCTGTGGGGCCTGGTCGCCTCTA TCCTGTTTATGGTGCTGTACTACAAAAAGGTGGGCCTGATTGCCACCAGCGCACTGCTGGCAAACCTGGTACTGATTGTC GGTATCATGTCACTGCTGCCGGGCGCCACGCTGACGATGCCTGGCATTGCCGGTATCGTGCTGACGCTGGCGGTGGCGGT CGATGCCAACGTACTGATCAACGAGCGTATTAAAGAAGAACTGCGTAACGGGCGTAGCGTGCAGCAGGCAATTCATGAGG GCTACAAAGGCGCCTTCTCCAGTATTGTCGATGCTAACGTCACCACCCTGATCAAAGTGGTGATTCTGTATGCGATCGGT ACGGGTTCCATTAAGGGCTTTGCGATTACAACGGCTATTGGTATTGCGACCTCAATGTTCACATCGATTGTCGGTACCCG CGCCATCATTAACCTGATGTACGGTGGCAAGCGCATCAAAAAGCTGTCTATCTGA Protein sequence : MLVVVLVIGLVYALPNLYGEDPAVQITGARGSAASEQTLDQIQNVLKQDNIQSKSVALENGAITARFANTDVQLRAREAI MKALGENYVVALNLAPATPRWLTLLAAQPMKLGLDLRGGVHFLMEVDMDTALSKLQEQNADSLRSDLREKNIPYTNVNKI ANYGVEIRFRDAASRDAAVKWLSSRHQDLVINSSGDDALRATMTDARLSEAREYAVQQNITILRNRVNQLGVAEPLVQRQ GSDRIVVELPGIQDTARAKEILGATATLEFRLVNTSVDPTAAASGRVPGDSEVKDMRDGRPVVLYKRVILTGDHITDSTS SMDEYNQPQVNISLDGAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRLGNSFRITGI SNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGQQNITQGLEACLWGLVASILFMVLYYKKVGLIATSALLANLVLIV GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRSVQQAIHEGYKGAFSSIVDANVTTLIKVVILYAIG TGSIKGFAITTAIGIATSMFTSIVGTRAIINLMYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-123 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-124 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-123 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-123 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-123 | 48 |
