Gene Information

Name : secF (PAJ_0292)
Accession : YP_005933168.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : protein-export membrane protein SecF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 360672 - 361583 bp
Length : 912 bp
Strand : +
Note : similar to Pantoea sp. At-9b, protein-export membrane protein SecF (NCBI: ZP_05727454.1) COG: intracellular trafficking, secretion, and vesicular transport subcellular localization as predicted by Psort 2.0: inner membrane

DNA sequence :
ATGCGCTGGGATACGCTGGCATTTATCATTTCGGGACTGTTAATCATCATCTCGATTGCCATTGTTGGCGTACGTGGTTT
TAACTGGGGTCTCGATTTCACCGGCGGTACGGTGATTGAGATCAACCTGGAAAAACCCGCTGACCTCGACACGATCCGTG
CCGAGCTGGTCAAGGCGGGCTTTCAGGAGCCGCTGATCCAGAACTTTGGTAGCAGCCGCGACGTGATGGTGCGTATGCCG
CCTGTCACGGGGCCTGCAGGCACAGAGTTAGGCAACAAAGTGGTCACGGTGATCAACCAGACCACCCAGCAAAACGCCAC
GGTAAAACGTATCGAGTTTGTTGGACCGAGCGTGGGTAGCGATCTGGCGCAGGCCGGAGCGTTGGCTCTGCTGTCGGCAC
TGATTGCGATTCTGATCTACATCGGTATTCGCTTTGAGTGGCGCCTGGCGCTGGGTACGGTGCTGGCGCTGGCGCACGAC
GTGATCATCACCTGTGGACTGCTGTCGCTGTTCCGGGTTGAAGTCGACCTCACCATCGTGGCCTCGCTGATGTCGGTTAT
CGGTTACTCGCTTAACGATAAAATCGTGGTTTCGGACCGTATTCGTGAGAACTTCCGCAAAATTCGTCGCGGCTCTTCTT
ACGACATTACCAACGTGTCCCTGACCCAGACGTTGAGCCGTACCTTGATCACCTCGCTGACGACGCTGGCGATGATCCTG
ATCCTGTTCATCTTTGGTGGTGCGCTGCTGAAAGGCTTCTCGCTGACCATGCTGATCGGTGTCACCATTGGTACGATTTC
GTCGATCTACGTCTCTTCAGCGCTGGCGTTGAAGCTGGGCATGAAACGCGAACACATGCTGGTACAGAAAGTGGAGAAAG
AGGGCGCAGATCAGCCTTCAATCCTGCCGTAA

Protein sequence :
MRWDTLAFIISGLLIIISIAIVGVRGFNWGLDFTGGTVIEINLEKPADLDTIRAELVKAGFQEPLIQNFGSSRDVMVRMP
PVTGPAGTELGNKVVTVINQTTQQNATVKRIEFVGPSVGSDLAQAGALALLSALIAILIYIGIRFEWRLALGTVLALAHD
VIITCGLLSLFRVEVDLTIVASLMSVIGYSLNDKIVVSDRIRENFRKIRRGSSYDITNVSLTQTLSRTLITSLTTLAMIL
ILFIFGGALLKGFSLTMLIGVTIGTISSIYVSSALALKLGMKREHMLVQKVEKEGADQPSILP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 9e-40 46
secF AAT96066.1 SecF Not tested T-PAI Protein 9e-40 46