Gene Information

Name : cspB (PAJ_3535)
Accession : YP_005936410.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4239455 - 4239694 bp
Length : 240 bp
Strand : -
Note : similar to Serratia proteamaculans 568, cold-shock DNA-binding domain-containing protein (NCBI: YP_001480086.1) COG: transcription subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
GTGGCTCAAAATGAAAAGGACACATCTATGTCAACTAAAATGACTGGTTTAGTAAAATGGTTTAACGCTGATAAAGGCTT
CGGCTTTATTTCTCCTCAGGACGGCAGCAAAGATGTATTCGTACATTTCTCTGCTATTCAGAGCAGCGATTTCAAAACAT
TAGATGAAGGCCAGAAAGTGGAGTTCTCAATCGAGAACGGCCCTAAAGGTCCTTCAGCTGGCAATGTTGTTGCTCTGTAA

Protein sequence :
MAQNEKDTSMSTKMTGLVKWFNADKGFGFISPQDGSKDVFVHFSAIQSSDFKTLDEGQKVEFSIENGPKGPSAGNVVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 6e-22 79
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 2e-09 48