Gene Information

Name : cspE (PAJ_0435)
Accession : YP_005933311.1
Strain : Pantoea ananatis AJ13355
Genome accession: NC_017531
Putative virulence/resistance : Unknown
Product : cold shock-like protein CspE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 545398 - 545607 bp
Length : 210 bp
Strand : +
Note : similar to Pantoea sp. At-9b, cold-shock DNA-binding domain protein (NCBI: ZP_05727591.1) COG: transcription subcellular localization as predicted by Psort 2.0: cytoplasmic

DNA sequence :
ATGTCTAAGATTAAAGGTAACGTTAAGTGGTTTAATGAATCTAAAGGATTCGGTTTCATTACTCCTGAAGATGGCAGCAA
AGATGTATTCGTACACTTCTCTGCGATCCAGAGCAATGGCTTCAAAACTCTGGCTGAAGGTCAGCGTGTAGAGTTTGAAA
TCACTGACGGCGCAAAAGGCCCATCTGCTGCTAACGTTATCAGTCTGTAA

Protein sequence :
MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQSNGFKTLAEGQRVEFEITDGAKGPSAANVISL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-19 75
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 3e-07 47