Gene Information

Name : PSTAA_4331 (PSTAA_4331)
Accession : YP_005940927.1
Strain : Pseudomonas stutzeri DSM 4166
Genome accession: NC_017532
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4653809 - 4654309 bp
Length : 501 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGG
CTGTAGTCAGCGTGCGGCCGACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAGGACGACGACATGGCCGCGATCC
GCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCTGTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCC
TATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCGCTGATTGTCGAAACCCTGCT
GCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCACGGCATGACCT
ACGCGGCTATCGCCACCGAACTGGGTGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTG
ATGCTGGTAGCGGAGGACTGA

Protein sequence : 
MLRQQMLHRFYADHHGWLNGWLRRQLGCSQRAADLAQDTFVRVLSKDDDMAAIREPRAYLHTIAKGLLINHWRRRQIEQA
YLDALALQPEPVAPSPESQALIVETLLRIDAMLAQLPTRVRSAFLMSQLHGMTYAAIATELGVSERMVKKYMAQAMLHCL
MLVAED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-34 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSTAA_4331 YP_005940927.1 ECF subfamily RNA polymerase sigma-70 factor VFG1049 Protein 5e-35 49