Gene Information

Name : ybbA (LMM7_1226)
Accession : YP_005947289.1
Strain : Listeria monocytogenes M7
Genome accession: NC_017537
Putative virulence/resistance : Resistance
Product : putative metabolite uptake ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1200522 - 1201250 bp
Length : 729 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGAGAAAAAAGGACGAGATAAAATGACCTATGTAGAAATGAAAGATGTCTCTAAATACTATCAAATGGGCGAGAA
CGTTGTCACTGCTAATGATAAAATCGCTTTCGGGATAAAAAAAGGTGAATTTGTTGTTATAGTCGGACCTTCCGGGGCCG
GGAAATCAACCGTTTTGAACATTCTAGGTGGAATGGATAGTGCAAGTGAAGGCAAAATTATGGTAGATGGGCAGGATATT
GCTCAATATAATGCAAAACAATTAACTAAATATCGGCGAACAGATGTCGGCTTTGTATTCCAATTTTACAATTTGGTACC
TAATTTGACTGCTAAAGAGAACGTAGAATTAGCTGCACAAATTGCGCCAAATGCATTAGACGCAGAAACTGTTTTAACTC
AAGTTGGATTAAGTCACAGATTAGACAATTTTCCAGCACAACTATCTGGCGGGGAACAACAGCGTGTCGCCATAGCGCGT
GCGCTTGCTAAAGCACCGAAACTACTTTTATGCGATGAGCCAACCGGGGCACTTGATTACGATACGGGAAAATCAGTCTT
AAAATTACTACAAGAAACTTGCCGTAACACGGGAACAACCGTTATTGTTATTACCCATAACACAGCGATTACGCCAATTG
CAGATCGAATTATTGAAATTAATAATGCAAAAGTTCGCAGCATCAAAGAAAATCCAGAACCAATGTCGATTGATGATTTA
GAATGGTAG

Protein sequence : 
MPEKKGRDKMTYVEMKDVSKYYQMGENVVTANDKIAFGIKKGEFVVIVGPSGAGKSTVLNILGGMDSASEGKIMVDGQDI
AQYNAKQLTKYRRTDVGFVFQFYNLVPNLTAKENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIAR
ALAKAPKLLLCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRSIKENPEPMSIDDL
EW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_005947289.1 putative metabolite uptake ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 1e-66 64
ybbA YP_005947289.1 putative metabolite uptake ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 7e-37 44
ybbA YP_005947289.1 putative metabolite uptake ABC transporter, ATP-binding protein CP001581.1.gene598.p Protein 3e-38 42
ybbA YP_005947289.1 putative metabolite uptake ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 9e-29 41