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Name : shiA2 (OCA4_c16810) Accession : YP_005950700.1 Strain : Oligotropha carboxidovorans OM4 Genome accession: NC_017538 Putative virulence/resistance : Unknown Product : shikimate transporter ShiA Function : - COG functional category : - COG ID : - EC number : - Position : 1819562 - 1820890 bp Length : 1329 bp Strand : + Note : - DNA sequence : ATGAGTTCAACCAAAGAGGGCGCCGGGGAGCCCCCGCGCCGCCAATATGTGGTCGCAGGCCTTGCGAGCATGATAGGCAC CACCATCGAGTGGTATGATTTCTTCCTGTACGGCTCAGCCGCTGCGCTGATCTTCAACAAGATCTTTTTCCCGAGTTTCG ATCCGATTTCCGGCACGCTCGCCGCGTTCGCGACCTATTCGGTCGGCTTCTTCGCACGTCCGCTCGGCGGCATTGTGTTC GGTCATTTCGGCGATCGCGTCGGCCGCAAATCGATGCTGCTCATCACACTGGTGCTGATGGGCGTTCCGACGATGCTGAT CGGCCTCATCCCATCCTACGAAACCATCGGCTATTGGGGCGCGGTGTTGCTCGTCATCATGCGCTTCCTTCAGGGCGTCG CTGTCGGCGGCGAGTGGGGCGGAGCCGTGCTGATGGCGGTTGAACACGCGCCGGAGGGCAAGAAGGGATTGTTCGGCAGT CTGCCGCAGGCAGGCGTCGGTCCCGGATTGCTGCTGTCATCGCTCGCGCTCAGCATGGTCGCGGCGCTGCCCGAAAAAGA CATGCTGACGTGGGGCTGGCGTCTGCCGTTCCTCGCGAGCGTCGTGCTGCTCGGCATCGGCTGGTTCATCCGCATCAAGG TCGCAGAGTCGCCGGACTTCGAGGTGATGGAAAGCAAGGGCAAGAAGGTCGGAATGCCGGTCGTCGAAGTCTTCCGCCGC TATCCGCGTGAAGTGCTCGCGGTGATCGGTGCGCGGCTTGGCGAAGTCACATGGTTCTACACCGTGGCCAGCTTCTCGCT CGCCTATGCCGCCGGCACGCTCTCCATCCCGCGGACGGTGATCCTCGACGCCACCATCTGGGGCGCGAGTTTCCTTCTGT TCACCGTGCCGATCTTCGGCATCCTCGGCGACAAGCTCCAGCACAAATGGGTGTTCATGATCGGCGCGGTCGGTGTGGTG ATCTGCGCCCCGATCTTCTTCAGCCTGCTCGCGACCAAGGATGTCTTCTGGATCAACGTCGCCATGGTCATGGCAATCAG CCTTGTGTACGCCAGCCTCTACGGCCCGGAGGGCTCGCTGTTCTCCAATCAATTCCCGCCGGAGGTTCGCTACACCGGCA TCTCGATTGGTGTTCAGGTCTCCGGCGCGCTGGGTGGCGGTTTGGCCCCGATCATCGCGACCTGGCTGCTTGCGCGTAAC AATGGCGATCCGCAATATGTCGTCTGGTATCTGAGCGCGCTCGCCGTGATTGCCTTCTTCAGTGCGTGGAGCATGCATGC GGCCTCGAAGTACTCGGCGTCGGCGCGGGAGGCGGCGGCAACAGCATGA Protein sequence : MSSTKEGAGEPPRRQYVVAGLASMIGTTIEWYDFFLYGSAAALIFNKIFFPSFDPISGTLAAFATYSVGFFARPLGGIVF GHFGDRVGRKSMLLITLVLMGVPTMLIGLIPSYETIGYWGAVLLVIMRFLQGVAVGGEWGGAVLMAVEHAPEGKKGLFGS LPQAGVGPGLLLSSLALSMVAALPEKDMLTWGWRLPFLASVVLLGIGWFIRIKVAESPDFEVMESKGKKVGMPVVEVFRR YPREVLAVIGARLGEVTWFYTVASFSLAYAAGTLSIPRTVILDATIWGASFLLFTVPIFGILGDKLQHKWVFMIGAVGVV ICAPIFFSLLATKDVFWINVAMVMAISLVYASLYGPEGSLFSNQFPPEVRYTGISIGVQVSGALGGGLAPIIATWLLARN NGDPQYVVWYLSALAVIAFFSAWSMHAASKYSASAREAAATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 7e-60 | 42 |
