Gene Information

Name : glcB (OCA4_c07280)
Accession : YP_005949758.1
Strain : Oligotropha carboxidovorans OM4
Genome accession: NC_017538
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 771511 - 773673 bp
Length : 2163 bp
Strand : -
Note : -

DNA sequence :
ATGACTCGCACTGACATCGCCGGCCTGAAGATCGCTCCCGTCCTGGCAGACTTCATTGACAAAGAAGCCGTGCCCGGCAC
CGGAATTTCCGCAGAAACGTTCTGGAAGGGCGTCGCCACGCTGGTGAAGGAATTCGCCCCGGACAACCGCGCCCTCTTGC
AGAAGCGCGACGACCTGCAGGCCAAGATCGACGAGTGGCATCGCGCCCGCCGCGGCAAGCCGTTCGACCTCGCCGCCTAC
ACCGCCTTCCTGAAAGAGATCGGCTATGTCGTGCCCGAGGCGCCGACCAGGCTTGTCACGACCTCGAACGTCGACGACGA
AATCGCACGCATTCATGGGCCGCAGCTTGTCGTGCCGCTCAGCAATGCGCGCTATTCGCTCAACGCCGCCAATGCGCGCT
GGGGCAGCCTGTACGATGCGCTCTACGGCACCGACGCCATTCCCTACGACCCGAACTACAAGAAGAACGGCTACGACAAG
AGCCGCGGCGCCAAGGTGATCGCCAAGGCGAAGGAGTTTCTCGACAAGTCGATCCCGCTCGCGAACGGCAGCCACGCCGA
CGTCACGGGTTACGCCATCGAGAACGGCGAACTGGTCGCGAAGCTCGCAGACGGCACCAGCAAGCTGAAGGACCCCGCGC
AGTTCATCGGCCACAAGGGCAGCCTTGAGGCACCCTCGGCGATCCTGTTCGTCAACCATCGCCTGCACATCGAGATCGCG
ATCGACCGCACCGGCGCGATCGGCAAGGACGATCCGGCCGGCGTCAACGACATCATCATCGAATCCGCCGTCACCACCAT
CCTCGACATGGAAGACAGCGTCGCCGCCGTCGATGCCGAGGACAAGGTGCTGATCTATCGCAACACGCTCGGCCTGATGC
AGGGCACGCTCGAAGCCGAATTCGACAAGGGCGGCAAGACCGTGCATCGCGCGCTCAATGCCGACCGCGCCTATACCGGC
CGCAACGGCAAGCCGCTGACACTGCCCGGCCGCAGCCTGATGTTGGTGCGCAACGTCTCGATCCACATGTACACCGACGC
CGTGCTCGACGCCGATGGCCACGAGATTCCGGAAGGCATTCTCGATGCCGCGATCACCGCGCTGCTGGCGCTGCACGACC
TCAAGGCGCGCCGCAACAGCCGCGCCGGTTCGGTCTACATCGTCAAGCCGAAGCTGCACGGCCCGGAGGAAGTGGCGCTG
ACGGTGCGCCTGTTCGGCCGCGTCGAGGAGTGCCTGTCGCTGCCGGCGAACACGCTCAAGATCGGCATCATGGACGAGGA
GCGCCGCACCACGGTCAACCTCAAGAACTGCATCCAGAACGCCGCGGAGCGCGTCTGCTTCATCAACACCGGCTTCCTCG
ACCGCACCGGCGACGAGATCCACACCTCGATCGAGGCGGGCCCGCTGGTGCGCAAGACCGAGATGAAGTCGAGCATCTGG
ATCAAGGCCTACGAGGACTCCAACGTCGACACCGGCCTCCTCAACGGCCTGCCCGGCCATGCCCAGATCGGCAAGGGTAT
GTGGGCCGCGCCCGACAAGATGGCGGACATGCTGGCGCAGAAGATCGCGCATCCGCAGGCCGGCGCCGCCACCGCGTGGG
TGCCCTCGCCCACCGCCGCGACGCTGCATGCGATGCACTATCACCTCGTCGATATCGACGCGCGGCAGAACGAACTGAAA
TCGCGCCCGCGCGCCAAGCTCGCCGACATCCTCACCATTCCGCTCGCCAACTCGAACTGGTCGTCCGACGACGTCAAGGA
AGAGCTCGACAACAACTGCCAGAGCATCCTCGGTTATGTCGTGCGCTGGCTCGATCAGGGCATCGGCTGCTCGAAGGTGC
CGGACATCCACAATGTCGGTCTGATGGAAGACCGCGCCACGCTGCGCATCTCGAGCCAGTTGCTCGCCAACTGGCTGCAC
CATGGCGTGATCGAGCGCGAGCAGGTGATGGAAGCCTTGAAGCGCATGGCGCTCATCGTTGACAAGCAGAACGCGGGCGA
TCCGAACTACAAGCCGATGGCGCCCGGCTATGACGGCATCGCCTTCCAGGCCGCCTGCGACCTCATCTTCAAGGGGCGCG
AGCAGCCGAACGGCTACACCGAGCACATCCTTCACGCCCGGCGGCGCGAGATCAAGGAAGCGGCGCGAAAGCTCGCATCC
TGA

Protein sequence :
MTRTDIAGLKIAPVLADFIDKEAVPGTGISAETFWKGVATLVKEFAPDNRALLQKRDDLQAKIDEWHRARRGKPFDLAAY
TAFLKEIGYVVPEAPTRLVTTSNVDDEIARIHGPQLVVPLSNARYSLNAANARWGSLYDALYGTDAIPYDPNYKKNGYDK
SRGAKVIAKAKEFLDKSIPLANGSHADVTGYAIENGELVAKLADGTSKLKDPAQFIGHKGSLEAPSAILFVNHRLHIEIA
IDRTGAIGKDDPAGVNDIIIESAVTTILDMEDSVAAVDAEDKVLIYRNTLGLMQGTLEAEFDKGGKTVHRALNADRAYTG
RNGKPLTLPGRSLMLVRNVSIHMYTDAVLDADGHEIPEGILDAAITALLALHDLKARRNSRAGSVYIVKPKLHGPEEVAL
TVRLFGRVEECLSLPANTLKIGIMDEERRTTVNLKNCIQNAAERVCFINTGFLDRTGDEIHTSIEAGPLVRKTEMKSSIW
IKAYEDSNVDTGLLNGLPGHAQIGKGMWAAPDKMADMLAQKIAHPQAGAATAWVPSPTAATLHAMHYHLVDIDARQNELK
SRPRAKLADILTIPLANSNWSSDDVKEELDNNCQSILGYVVRWLDQGIGCSKVPDIHNVGLMEDRATLRISSQLLANWLH
HGVIEREQVMEALKRMALIVDKQNAGDPNYKPMAPGYDGIAFQAACDLIFKGREQPNGYTEHILHARRREIKEAARKLAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 57