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Name : glcD1 (OCA4_c08320) Accession : YP_005949860.1 Strain : Oligotropha carboxidovorans OM4 Genome accession: NC_017538 Putative virulence/resistance : Unknown Product : glycolate oxidase FAD-binding subunit GlcD Function : - COG functional category : - COG ID : - EC number : - Position : 882013 - 883506 bp Length : 1494 bp Strand : + Note : - DNA sequence : ATGACGATCAAGATGCCTGCGCCCGATGAGGGCATTCTCGCCCGCCGTGATGAGATCATCGCTGCCTTGCGCGAGATCGT GCCCGGCGAGGGCGTGATCGATAGTGAACGGGAAATGATGCCCTACGAGTCGGATGCACTGACCGCCTATCGTCAGCCGC CGATGGTCGTGGTGCTGCCCGATACCACTGAGCAGGTCGCGCAGGTCCTGAAGTATTGCTACGACAACGGCATCCGCGTG GTGCCGCGCGGCAACGGCACCTCGCTGTCGGGCGGCTCGTTCCCGCTTGCGGACGGCGTGCTGCTCGGGCTGTCGAAGTT CAAGCGCGTGCGCGAGATCGATTTTGACAACCGCGTCGCGGTGGTCGAGCCCGGCATGACCAACCTCGCGGTGAGTGAGG CGGTTGCGCATGAGGGCTTCTATTATGCGCCGGACCCGTCCTCGCAGATCGCCTGTTCGATCGGCGGCAACATCGCGGAG AATTCCGGCGGCGTGCACTCCCTGAAATACGGCCTCACTACCAACAACGTGCTGGGCTGCGAGTTCGTGCTGATCACCGG CGAGATTCTGCGCATCGGCGGCCGCGCACCGGAGAACGACGGCTACGACCTGATGGGCATCATCACGGGCTCGGAAGGTC TTCTCGGTGTCGTCACCGAGATCACCGTACGCATCCTCAAGAAGCCGGAAACCGCACGCGCGCTGATGGTCGGTTTCGCC GAAGTGGAAGCCGCGGGCGAATGCGTCGCGCGGATCATCGGCGCGGGCATCATTCCCGGCGGCATGGAGATGATGGACAA GGACGCGATCCATGCCGCGGAAGCGTTCGTGAAGGCGGGCTATCCGCTCGACGTCGAGGCGCTGCTCATCATCGAACTCG ACGGCCCGAGCATCGAGGTCGACGAACTGATCCGCCGTGTCGAGGCGATCGCGCTCGATTGCCGTTCCACCACCTGCCAG ATATCGAACTCCGAGCAGGAGCGGCTTCTGTTCTGGGCCGGGCGCAAGGCCGCGTTCCCCGCAGTTGGTCGGCTGTCGCC GGATTATCTCTGCATGGACGGCACCATTCCGCGCGGCAAGCTGCCGGAAGCGCTCGCCGGCATCCGCGAGCTTGGCAAGA AATACGGCCTGCGCTGCGCCAACGTGTTCCACGCGGGCGACGGCAATCTGCATCCGCTGATCCTGTACGATGCCAACGTC GCTGACGAGATGCAGCGGGCGGAGGATTTCGGTGCCGATATTCTGCGGCTGTGCGTGAAGCTCGGCGGCGTCCTCAGCGG CGAGCACGGCATTGGCGTCGAGAAGCGCGACCTGATGCCGGAAATGTTGAGCGACATCGATCTCGCTCATCACCAGCGCA TCAAGTGCGCGTTCGATGCCAAGGGGCTGCTCAACCCCGGCAAGATGTTCCCGACGCTGCATCGCTGCGCCGAACTGGGG CGGATGCATGTGCACGGCGGCAAGCTGCCATTCCCCGACATTCCGAGGTTCTGA Protein sequence : MTIKMPAPDEGILARRDEIIAALREIVPGEGVIDSEREMMPYESDALTAYRQPPMVVVLPDTTEQVAQVLKYCYDNGIRV VPRGNGTSLSGGSFPLADGVLLGLSKFKRVREIDFDNRVAVVEPGMTNLAVSEAVAHEGFYYAPDPSSQIACSIGGNIAE NSGGVHSLKYGLTTNNVLGCEFVLITGEILRIGGRAPENDGYDLMGIITGSEGLLGVVTEITVRILKKPETARALMVGFA EVEAAGECVARIIGAGIIPGGMEMMDKDAIHAAEAFVKAGYPLDVEALLIIELDGPSIEVDELIRRVEAIALDCRSTTCQ ISNSEQERLLFWAGRKAAFPAVGRLSPDYLCMDGTIPRGKLPEALAGIRELGKKYGLRCANVFHAGDGNLHPLILYDANV ADEMQRAEDFGADILRLCVKLGGVLSGEHGIGVEKRDLMPEMLSDIDLAHHQRIKCAFDAKGLLNPGKMFPTLHRCAELG RMHVHGGKLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-123 | 56 |
