|
Name : cobT (PPM_1259) Accession : YP_005958903.1 Strain : Paenibacillus polymyxa M1 Genome accession: NC_017542 Putative virulence/resistance : Unknown Product : nicotinate-nucleotide- dimethylbenzimidazolephosphoribosyltransferase Function : - COG functional category : - COG ID : - EC number : 2.4.2.21 Position : 1522462 - 1523532 bp Length : 1071 bp Strand : + Note : - DNA sequence : ATGAACGACAAGCTGCGTCAGCTGATCGATAGCATTGCCCAGCCGGATGGAGTGGCGGCTTCGGCAGCTTCAGCACATTT GGACCAATTAACGAAGCCACCTGGAAGTCTTGGAAAGCTGGAGAGTTTGGCCATCCAGTTAGCAGGAATTACTGGCGTGG ATAAGCCTGAATTTGATCGTAAAACGGTGATGGTCATGGCTGCGGATCATGGTGTGTGTGAAGAGGGAGTTAGCGCCTTT CCAGCTGAGGTTACGCAGCAAATGCTGTATAACATGCTGTCAGGCGGCGCAGCAATTAATGTGCTGGCACGTCATGCGGG CGCTGATGTCCAGGTAGTAGATGTTGGCGTGAATGCGGATGTCTCTCACCCGAGTTTGGTGAATCGTAAGGTGCGCATGG GCACTTCGAATATGGCTAAAGGGCCAGCCATGCTGCGTACGGAAGCGGAACAAGCAGTTTTGGCCGGAGCTGAAGCTGTA GCAGAAGCGGTTAAAGGTGGCACACGGCTATTCGTTACCGGAGAGCTGGGCATCGGGAATACGACAGCCAGCGCTGCGGT CGTGTGTGCGCTCACCGGGCTTGAGCCGGAAGTTATCGTAGGCCGGGGGACAGGTGTAGATTCGGCGGGACTTACCCGTA AAATAGCCGTTGTCTGCCGCGCATTGGAGGTGAATCAGCCGGATGCCAATGACGCGCTTGACGTGCTGACCAAGGTCGGC GGTCTGGAGATTGCCGCCCTGGCAGGCGTCATCCTCGGCGCAGCCGCACATCGCTGTCCAGTGGTGCTGGACGGCTTTAT TTCCGGCGCGGCTGCTCTCGCTGCACGCGCAATTGCGCCTGCAAGCGCGGCGTACATGCTTGCTTCGCACGCCTCGGACG AGCGCGGACACGCGGCGGTGCTTCGCCAGCTCAAGCTGGAGCCCATGCTCCATCTGGACATGCGGCTCGGGGAGGGCACG GGCGGTGCGCTGAGCTTGCACCTGATTGATGCGGCGTGCCGCATTATGCGCGAAATGGCGACCTTTGCCGATGCAGGCGT ATCGGACGGTCAGGGAGCCGCGCAGCGATGA Protein sequence : MNDKLRQLIDSIAQPDGVAASAASAHLDQLTKPPGSLGKLESLAIQLAGITGVDKPEFDRKTVMVMAADHGVCEEGVSAF PAEVTQQMLYNMLSGGAAINVLARHAGADVQVVDVGVNADVSHPSLVNRKVRMGTSNMAKGPAMLRTEAEQAVLAGAEAV AEAVKGGTRLFVTGELGIGNTTASAAVVCALTGLEPEVIVGRGTGVDSAGLTRKIAVVCRALEVNQPDANDALDVLTKVG GLEIAALAGVILGAAAHRCPVVLDGFISGAAALAARAIAPASAAYMLASHASDERGHAAVLRQLKLEPMLHLDMRLGEGT GGALSLHLIDAACRIMREMATFADAGVSDGQGAAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cobT | YP_853092.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | Not tested | PAI IV APEC-O1 | Protein | 4e-43 | 47 |
