Gene Information

Name : PAM18_1041 (PAM18_1041)
Accession : YP_005973630.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1139621 - 1140130 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :

GTGTCGAGCGCCGACCTCGCCCATGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCT
GCGGCGCCGCCTCGGCTGCCCGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGG
CCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCATCGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGAC
GTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAAGAGACCCGCGCCATCGTCCT
GGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCGCCACTGGCCAAGGAGACCTTCCTGCTGGCCCAACTCG
ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGGCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCG
CAACGCTGCTACTTCGCCGAGCTGCCATGA

Protein sequence :

MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQD
VERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAA
QRCYFAELP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	8e-37	53

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PAM18_1041	YP_005973630.1	RNA polymerase sigma factor	VFG1049	Protein	3e-37	53