Gene Information

Name : PAM18_1701 (PAM18_1701)
Accession : YP_005974290.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative TonB-dependent receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1869763 - 1871928 bp
Length : 2166 bp
Strand : +
Note : -

DNA sequence :
ATGTCGTCCGTGAGTTCGTTGTCGCGCCTGGCCGTCGCCATCGCGCTGGGTGTGTCCATGCAGGCGGCGCAGGCCGAAGA
GGAAGCCAAGGAGCTGGGCACGGTCACCGTGGTCGGCGACTGGCTGGGCGAAGCCGACCAGGCGGTGGTGCAGAACCATC
CCGGTGCGCGCAGCGTGGTGCGTCGTCGGGAAATGCTCGAGAGCGGTGCGCAGAACGTCCGCGACGTGCTGCGCAAGGTG
CCCGGCGTGCAAGTGCAGGACAACAACGGTACCGGCGGCAGCGACATCTCCCTGAACGTCGGGGTGCGTGGCCTGACTTC
ACGCCTATCGCCGCGCTCGACGGTGATGATCGACGGCGTGCCGGCGGCGGTGGCGCCCTACGGCCAGCCGCAGCTGTCGA
TGATGCCGCTGTCCATCGGCAACCTGGAGAGCATCGACGTCGTGCGCGGCGCCGGCTCGGTGCGCTACGGCCCGCAGAAC
GTCGGCGGGGTGATCAACTTCGTGACCCGGGCGATTCCGGAGAAGTTCTCCGGCGAAATCGGCACCACCATCGAGCATGC
CGGCCACGGCGGCTGGAAGAAGCTCAACCAGGCGTTCCTCGGCGGGACCGCCGACAACGGCCTGGGCGTGGCGCTGCTGT
ATTCCGGGGTGAAGGGCGCCGACTACCGCGACGGCAACAACGACAACGATATCGACGACGTGCTGCTCAAGACCCATTGG
CAGCTCACCGACAGCGACCAGTTGGCGGCCAACTTCCACTACTACGACGCCTACGCCGATATGCCAGGCGGCCTGACCCA
GGCGCAGTACGACGACGATCCCTTCCAGTCGGTACGCGACTGGGACAATTTCCGTGGTCGGCGCAAGGACTTCTCGCTGA
AGTACACCCGCCAGGTCGACGACCTCACCCAGTTCGAGGTGCTCACCTACTACAGCGACAGTTTCCGCGGCAGCAGCATC
GCCGCGCGCAACCTCAGGACCATCACCTCGTACCCGCGCGACTACCATGTGTTCGCGGTGGAGCCGCGGGTCTCGCGGAT
CTTCTTCGCCGGCCCGACCACCCAGGAGGTCGGCATCGGCTACCGCTACCTGAAGGAAGCGATGAACGAGCGCGCCAGCC
AGCTGGCCCTGGTCGACAATGTGCCGACCGTGCGTCCCGGCTCGGACGGCCATACCTACCAGGACCGTACCGGCGGTACC
GAGGCCAGCGCCTTCTACATCGACGACAAGATCGATGTCGGCAACTGGACCATCACCCCCGGCATCCGCTTCGAGAAGAT
CGACAGCGACTGGCGCGACCGCCCGGTGCTCGGCCTGAACGGCAAGCCGGTGCAGGAGAAGAAGCGCAGCAAGGACTACA
ACGAACCGCTGCCGGCGCTGAGCCTGATGTATCACTTGAGCGACGAGTGGAAGCTGTTCGCCAACTACTCCGAATCGTTC
GGCAGCCTGCAGTACTTCCAGCTCGGCCAGGGCGGCAGCGGCAACGATACCGCCGCCGGCCTGGAGCCGGAGAAGGCCAA
GACCTACGAACTGGGCACGCGCTACGACAACGGCAGCTGGGGCGGCGAGATCACGCTGTTCTACATCGACTTCGACGACG
AGCTGCAGTACGTCAGCAACGACGTCGGCTGGACCAACCTCGGCGCCACCAAGCACCAGGGCATCGAGACTTCCGGCCAC
TATGACTTCGCCGCTCTCGATCCGCGCCTGGACGGCCTGTCGGTCTACGGCAGCCTCACCTATACCCGTGCCACCTACGA
AGGCGACATTCCCTCCTTCAAGGGGCGCGACCTGCCGCTCTACTCGCGCCAGGTGGCCACCGCCGGGGTGCGCTACGAGG
TCGACCGCTGGACCTACAACCTCGACGCCTTCGCCCAGTCCATGCAGCGCGCGCCAGGGCTGAGCACCGACAGCCAGGGC
AACTTCACCCACAACTACATCACCGAGCCCAGCGCCGACGGCCAGTACGGCGACATTCCCGGCTACGTGACCTGGAATGC
CCGCGTCGGCTACGACTTCGGCCCGCAGGCGTCGAACCTGAAGCTCGGACTCGGGGTGAAGAACCTGTTCGACAAGCAGT
ATTTCACCCGCTCCAGCGACAACAATTCGGGAATCTACGTGGGTCAGCCGCGAACGCTGTTCATGCAGGCCAGCGTCGGT
TTCTGA

Protein sequence :
MSSVSSLSRLAVAIALGVSMQAAQAEEEAKELGTVTVVGDWLGEADQAVVQNHPGARSVVRRREMLESGAQNVRDVLRKV
PGVQVQDNNGTGGSDISLNVGVRGLTSRLSPRSTVMIDGVPAAVAPYGQPQLSMMPLSIGNLESIDVVRGAGSVRYGPQN
VGGVINFVTRAIPEKFSGEIGTTIEHAGHGGWKKLNQAFLGGTADNGLGVALLYSGVKGADYRDGNNDNDIDDVLLKTHW
QLTDSDQLAANFHYYDAYADMPGGLTQAQYDDDPFQSVRDWDNFRGRRKDFSLKYTRQVDDLTQFEVLTYYSDSFRGSSI
AARNLRTITSYPRDYHVFAVEPRVSRIFFAGPTTQEVGIGYRYLKEAMNERASQLALVDNVPTVRPGSDGHTYQDRTGGT
EASAFYIDDKIDVGNWTITPGIRFEKIDSDWRDRPVLGLNGKPVQEKKRSKDYNEPLPALSLMYHLSDEWKLFANYSESF
GSLQYFQLGQGGSGNDTAAGLEPEKAKTYELGTRYDNGSWGGEITLFYIDFDDELQYVSNDVGWTNLGATKHQGIETSGH
YDFAALDPRLDGLSVYGSLTYTRATYEGDIPSFKGRDLPLYSRQVATAGVRYEVDRWTYNLDAFAQSMQRAPGLSTDSQG
NFTHNYITEPSADGQYGDIPGYVTWNARVGYDFGPQASNLKLGLGVKNLFDKQYFTRSSDNNSGIYVGQPRTLFMQASVG
F

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 1e-135 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_1701 YP_005974290.1 putative TonB-dependent receptor VFG1047 Protein 6e-136 45