Gene Information

Name : PAM18_3129 (PAM18_3129)
Accession : YP_005975714.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative sigma-70 factor, ECF subfamily
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3495138 - 3495644 bp
Length : 507 bp
Strand : +
Note : -

DNA sequence :
ATGCCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTT
GCGGCGACGCCTGGGCTGCGCGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGG
TACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGTCGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCG
CTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCGGAACAGCGGTTGATGGTGCT
GGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG
AAGGCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGTTCGGTCAAGCGCTACATGCAGCAGGCCTTC
CGCCAGTGCCTGGAGCTGATGGAATGA

Protein sequence :
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQS
LERAYLDALANLPEDLAPPPEQRLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAF
RQCLELME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-36 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3129 YP_005975714.1 putative sigma-70 factor, ECF subfamily VFG1049 Protein 7e-37 50