Gene Information

Name : PAM18_5007 (PAM18_5007)
Accession : YP_005977589.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5541765 - 5542301 bp
Length : 537 bp
Strand : -
Note : -

DNA sequence :

ATGAATGCGCCGAGTTCCTGCCTGTCCGCGGACCGCGACGGCGTCGCCACGCTCTACCGTGAAAACCATGCCTGGCTGCG
CAACTGGCTGGCCTACCGACTCCGCTCCTGGGGACGCGGCGTGGCCGACGACCTGGCCCATGACACCTTCCTGCGCATTC
TCGCCAGCCGCGACGGCGGCCAGCGTGAAGCGATCCGTCAGCCGCGCGCCTATCTCACCCGTATCGCCAACTGCGTGCTG
GTCAGTTGGCGCCGTCGCCAATCGCTGGAACTTGCCTGGCTGGAGGCCCTGGCCACGCTGCCCGAGCCGTTGCAGCCGTC
GCCGGAACAACAGAGCGTGATCGTCGAGACCCTGCACGAGATCGACGCGCTGCTCGATACCCTGCGCCCGCGGGTGAAAC
AGGCATTCCTGATGGCGACGCTGGACGGCATGAAGCAGAAGGACATCGCCCAGGCGCTGGGCGTCGCGCTGCCGACGGTG
AAGAAGTTCATCCACCAGGCCTACGTGACCTGCCTGAGCCTGATGCCCGATGAATGA

Protein sequence :

MNAPSSCLSADRDGVATLYRENHAWLRNWLAYRLRSWGRGVADDLAHDTFLRILASRDGGQREAIRQPRAYLTRIANCVL
VSWRRRQSLELAWLEALATLPEPLQPSPEQQSVIVETLHEIDALLDTLRPRVKQAFLMATLDGMKQKDIAQALGVALPTV
KKFIHQAYVTCLSLMPDE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	9e-19	43

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PAM18_5007	YP_005977589.1	RNA polymerase sigma factor	VFG1049	Protein	4e-19	43