Gene Information

Name : colR (NCGM2_1222)
Accession : YP_005979478.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1331221 - 1331904 bp
Length : 684 bp
Strand : +
Note : similar to GI:116052415; similar to PA14_56950 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGCGAATACTGGTGGTCGAAGACAACCGCGACATCCTGGCCAACCTGGCCGATTACCTGTCGCTCAAGGGCTATACCGT
GGATTGCGCGCAGGACGGGCTGTCCGGCCTGCACCTGGCGGCCACCGAGCACTACGACCTGATCGTGCTCGACGTGATGC
TGCCGGGAATCGACGGCTATGCCCTGTGCCGGCGCCTGCGCGAAGACGCACGGCGCGATACGCCGGTGATCATGCTCACC
GCCCGCGACCAGTTGGACGACCGCCTGCAGGGGTTTCGTTCCGGCGCCGACGATTACCTGGTCAAGCCCTTCGCCCTTTC
CGAACTTTCCGCACGCATCGAGGCGGTGCTGCGTCGCGCCCAGGGTGGCGGCCGCCGCGAGCTGAGCGTGGCCGATCTGA
GCTATGACCTGGACACCCTGGAGGTCAAGCGCGCGGGCAAGTCGCTCAAGCTCAACCCGATCGGCCTCAAGCTGCTCGCC
GTGCTGATGCAGAAGAGCCCCCATGTGGTGCGCCGGGATGCCCTGGAAGAAGCGGTCTGGGGCGACGACTGCCCGGACAG
CGACAGCCTGCGCAGCCACGTCCATCAACTCCGTCAGGTGATCGACAAGCCATTCTCCGTGGCCTTGCTGCATACGGTGC
ATGGCGTTGGCTACCGCCTGGCGGAGGAGCCGAATGGAGTATAA

Protein sequence : 
MRILVVEDNRDILANLADYLSLKGYTVDCAQDGLSGLHLAATEHYDLIVLDVMLPGIDGYALCRRLREDARRDTPVIMLT
ARDQLDDRLQGFRSGADDYLVKPFALSELSARIEAVLRRAQGGGRRELSVADLSYDLDTLEVKRAGKSLKLNPIGLKLLA
VLMQKSPHVVRRDALEEAVWGDDCPDSDSLRSHVHQLRQVIDKPFSVALLHTVHGVGYRLAEEPNGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_005979478.1 putative two-component response regulator BAC0125 Protein 8e-37 42
colR YP_005979478.1 putative two-component response regulator BAC0197 Protein 6e-37 42
colR YP_005979478.1 putative two-component response regulator BAC0487 Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
colR YP_005979478.1 putative two-component response regulator VFG1390 Protein 1e-35 42
colR YP_005979478.1 putative two-component response regulator VFG0596 Protein 3e-37 42