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Name : NCGM2_1423 (NCGM2_1423) Accession : YP_005979674.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : - COG ID : - EC number : - Position : 1569504 - 1570109 bp Length : 606 bp Strand : - Note : similar to AA sequence:RefSeq:YP_001565183; similar to lytic transglycosylase catalytic subunit [Delftia acidovorans SPH-1] DNA sequence : ATGGCAGCGCCAGCCGTAGCGGCCACCTCCGTTTCGCAGTGCTTGCGCGCACTGGTGATCGCGGCGGGCCTGTGCGCCTG CGCCGCCCATGCCCAGGAGCTTCCGCCACCGGCTTACCAGCTTGCCGCACAGCGCGCGGGCATCCCCTCGTCGGTGCTCT ACGCCGTGGCCTTGCAAGAGAGCGGCATCCGACGCAATGGACGCATCGTCCCGTGGCCGTGGTCGCTCAACGTCGCCGGT CAGTCTCACCGCTTCGCCACCCGTGCCGACGCCTGCGCCGGTTTGCAGCAGGCGATGCGCTCCACGTCGCACACGCGCAT CGACGCGGGCCTGGGTCAGATCAACCTCGGCTACCACCAGCAGCGCTACGCCAGCCCGTGCGACCTGCTCGACCCATACA GCAACCTCGCCATCGCCGCTGAAATCCTGAAGGAGCAGCACACCACTGGCGAGGACTGGTTACTGGCAATCGGTCGCTAC CACCGTCCTGCGGGCGGAGAGCCTGCCGCCCGCTATCGGCGCAGCGTGTCGCGCCACCTTGCCCGTGTGCAGGGCACGCG CCCAATCGCTGCGGCCCTCGCCGCGCACCTGGAGACATCCCCATGA Protein sequence : MAAPAVAATSVSQCLRALVIAAGLCACAAHAQELPPPAYQLAAQRAGIPSSVLYAVALQESGIRRNGRIVPWPWSLNVAG QSHRFATRADACAGLQQAMRSTSHTRIDAGLGQINLGYHQQRYASPCDLLDPYSNLAIAAEILKEQHTTGEDWLLAIGRY HRPAGGEPAARYRRSVSRHLARVQGTRPIAAALAAHLETSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 6e-70 | 85 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 4e-58 | 77 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 9e-45 | 58 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-32 | 50 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-32 | 49 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-35 | 48 |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-21 | 43 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 4e-26 | 43 |
