Gene Information

Name : NCGM2_3470 (NCGM2_3470)
Accession : YP_005981703.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-70 factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3791393 - 3791911 bp
Length : 519 bp
Strand : -
Note : similar to GI:116050412; similar to PA14_32710 of P. aeruginosa UCBPP-PA14

DNA sequence :

ATGTCCGCCCCGATCCTTCTCAGCGCCCACCATCGCGCCATGCATGCGCTGTACAGCGAGCACCATGGCTGGTTGCAGAA
CTGGTTGCGCGGCAAGCTGGGCTGCGCGGCGGACGCGGCGGACCTGGCCCAGGACACCTTCCTGCGCATCCTGCTCAAGC
GCGAACTGCGCGAGATCGGCATGCCGCGCGCGTTCCTGCGGACCATCGCCCGCGGCCTGGTGATCGACCACTGGCGTCGC
GAGGAACTGCAGCGCGCCTACCTCGAAAGCATCGCCCACTTGCCCGAGGCACAGGCGCCGTCGCCCGAGGCGCGGGAACT
GGTGCTGGAACTGCTGGAGGAAATCTCGCGGATGCTCGACGGGCTCAAGCCGAAGGTCCGCACCGCCTTCCTCCTGGCCC
AGTGCGAAGACCTCAGCCACCGGCAGATCGCCGAACGCATGGGGGTTTCCCAGCGTAGCGTCGAGCGCTACGTGGCCGAG
GCGCTGTACCACTGCTACCTGCTGCGCTACGGCGAATGA

Protein sequence :

MSAPILLSAHHRAMHALYSEHHGWLQNWLRGKLGCAADAADLAQDTFLRILLKRELREIGMPRAFLRTIARGLVIDHWRR
EELQRAYLESIAHLPEAQAPSPEARELVLELLEEISRMLDGLKPKVRTAFLLAQCEDLSHRQIAERMGVSQRSVERYVAE
ALYHCYLLRYGE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	1e-29	51

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
NCGM2_3470	YP_005981703.1	ECF subfamily RNA polymerase sigma-70 factor	VFG1049	Protein	4e-30	51