Gene Information

Name : secF (NCGM2_5007)
Accession : YP_005983215.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : preprotein translocase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5378712 - 5379632 bp
Length : 921 bp
Strand : -
Note : similar to GI:116051845; similar to PA14_14650 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAATATCAAGATCGGTACCATCAACTTCATGGGCATCCGCAACATCGCGTTTGCCGTCACCCTGATCCTGACCGTCAT
CGCCCTGGGCAGCTGGTTCACCAAGGGCATCAACTTCGGCCTCGACTTCACCGGCGGTACGCTGATCGAGCTGACCTACG
AACAACCGGCCGATCTCGGCAAGGTGCGTGGTCAACTGGTCGGCGCCGGCTACGAGGACGCCGTGGTGCAGAGCTTCGGC
GACGCCCGCGACGTGCTGGTGCGGATGCCCAGCGAGGACCCGGAACTGGGCAAGAAGGTCGCTACCGCCTTGCAGCAGGC
CGATACCGGCAACCCGGCGAACCTGAAGCGGGTCGAGTACGTCGGCCCGCAGGTGGGTGAAGAACTGCGCGACCAGGGCG
GCCTCGGCATGCTCCTGGCGCTGGGCGGCATCCTGCTGTACGTCGGCTTCCGCTTCCAGTGGAAGTTCGCCCTCGGGGCG
ATCCTCTCGCTGGTGCACGATGCGATCATCGTGATGGGCGTGCTGTCGTTCTTCCAGGTGACCTTCGACCTGACCGTCCT
CGCCGCTGTGCTGGCGGTGGTCGGTTACTCGCTGAACGACACCATCGTGATCTTCGACCGGGTGCGCGAGAACTTCCGCG
TGCTGCGCAAGGCCAGTCTGATCGAGAACCTGAACATCTCCACCAGCCAGACCCTGTTGCGCACCATCGCCACCTCGGTC
TCCACGCTGCTGGCCATCGCCGCGCTGCTGTTCTTCGGCGGCGACAACCTGTTCGGTTTCTCCATCGCCCTGTTCGTCGG
TGTAATGGCGGGTACCTACTCGTCGATCTACATCGCCAACGTGGTCTTGATCTGGCTGAACCTGACCAGCGAGGACCTGA
TCCCGCCGCAGGCCAAGGACACCGTCGACGATCGCCCCTGA

Protein sequence :
MNIKIGTINFMGIRNIAFAVTLILTVIALGSWFTKGINFGLDFTGGTLIELTYEQPADLGKVRGQLVGAGYEDAVVQSFG
DARDVLVRMPSEDPELGKKVATALQQADTGNPANLKRVEYVGPQVGEELRDQGGLGMLLALGGILLYVGFRFQWKFALGA
ILSLVHDAIIVMGVLSFFQVTFDLTVLAAVLAVVGYSLNDTIVIFDRVRENFRVLRKASLIENLNISTSQTLLRTIATSV
STLLAIAALLFFGGDNLFGFSIALFVGVMAGTYSSIYIANVVLIWLNLTSEDLIPPQAKDTVDDRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96066.1 SecF Not tested T-PAI Protein 4e-88 77
secF AAT96102.1 SecF Not tested T-PAI Protein 2e-88 77