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Name : secD (NCGM2_5008) Accession : YP_005983216.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : preprotein translocase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 5379643 - 5381505 bp Length : 1863 bp Strand : - Note : similar to GI:116051846; similar to PA14_14630 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGCTCAACAAGTATCCTCTGTGGAAATATCTGCTGATCCTGGCGGTCCTCGCCGTCGGGTTCATCTATTCCGCACCCAA CCTCTACCCGGACGACCCGGCGGTGCAGATCAGCGGCGCCAGCACGGCGCTGCAGGTCACCCAGGCCGATGTCGACCGCG CTGCCAAGGCGCTGACCGACGCCGGTATCGCGGTGAAGGCCGACAGCCTGTCGAAGAAGGGCGGCCTGATCCGCCTGGTC AAGCAGGACGACCAGCTTCCCGCCAAGGAAGTGGTGCGCCGGACCCTGGGCGACGACTACGTGGTGGCGCTGAACCTGGC CCAGACCACTCCCGAGTGGCTGCGCAAGCTGGGCGGCAGCCCGATGAAGCTCGGCCTGGACCTGTCCGGCGGCGTGCACT TCCTGCTGGAAGTGGACATGGACAAGGCGGTCGATGCCCGCCTGAAGGTCTATGAAAGCGAAGTGAAGAGCCTGCTGCGC AAGGAGCGCGTGCGCTACCGCAGCCTGCCGATCCAGGATCGCGCGATCCAGCTCGGCTTCACCGACAGCGAATCCCTGGA CAAGGCGCGCAGCCTGATCGCCAAGGACTTCCGCGATTTCGAGGTCGTGCCCGAAGAGCGCAACGGCCTGCAGGTCCTGC GTGTCGCCCTGACCCAGGCCAAACTGGCGGAAATCCGCGAGTACTCCATCAAGCAGAACCTCACCACCGTCCGCAACCGG GTCAACGAGCTGGGCGTATCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAATCGCATCGTGGTCGAGCTGCCGGGCGTGCA GGACACCGCGGAAGCCAAGCGGATCCTCGGCAAGACCGCCAACCTCGAATTCCGCCTGGCCGCCGAGCCGGACGCCCTGA AGTCCGCCACCGAGACCTTCGAGTTCCGCGAGCCGCGCCGTCCGCCGGTGCCGCTGGAGCGCGGGGTGATCATCACCGGC GACCAGGTCACCGACGCCAGCGCCAGTTTCGACGAGAACGGCCGCCCGCAGGTGAACATCCGCCTGGATGGCCATGGCGG CGAGCTGATGAACCGCGCCACCCGCAACAACGTCGGCCGCAGCATGGCGGTGGTGTTCATCGAGCAGAAGCCGGTGACCC GCTACACCAAGCAGATGGTCGATGGCGTCGAGAAGGAGGTCGCGGTTCCGGCGTTCAAGGAAGAGAAGCAGATCATCAGT CTGGCGACCATCCAGTCGCCGCTGGGCAACCAGTTCCGCATCACCGGCCTCGATGGCCCGGGCGAGTCTTCCGAACTGGC CCTGCTGCTGCGTGCCGGCGGCCTGGCTGCACCGATGTACTTCGCCGAAGAACGCACCATCGGCCCGAGCCTGGGGGCGG ACAACATCGCCAAGGGTGTCGATGCGTCGCTCTGGGGCATGCTCTTCGTATCGCTGTTCATCATCGTCATCTACCGTTTC TTCGGCGTGATCGCCACCGTTGCGCTGGCCTTCAACATGGTCATGCTGGTAGCGCTGATGTCGATCCTCGGCGCGACCCT GACCCTGCCGGGCATCGCCGGTATCGTGCTGACCATGGGCATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGATAC GCGAGGAGCTGGCCAATGGCATGTCGGTCCAGCGGGCGATCCACGAAGGCTTCAACCGTGCCTTCACCGCGATCCTCGAC GCCAACCTGACCTCGCTGCTGGTCGGCGGCATCCTCTACGCCATGGGCACCGGCCCGGTGAAAGGATTTGCCGTGACCAT GTCGCTCGGCATCATCACCTCGATGTTCACGGCCATCATGGTCACCCGCGCAATGGTCAACCTGATCTTCGGCGGGCGTG ACTTCAAGAAGCTGTGGATCTAA Protein sequence : MLNKYPLWKYLLILAVLAVGFIYSAPNLYPDDPAVQISGASTALQVTQADVDRAAKALTDAGIAVKADSLSKKGGLIRLV KQDDQLPAKEVVRRTLGDDYVVALNLAQTTPEWLRKLGGSPMKLGLDLSGGVHFLLEVDMDKAVDARLKVYESEVKSLLR KERVRYRSLPIQDRAIQLGFTDSESLDKARSLIAKDFRDFEVVPEERNGLQVLRVALTQAKLAEIREYSIKQNLTTVRNR VNELGVSEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAAEPDALKSATETFEFREPRRPPVPLERGVIITG DQVTDASASFDENGRPQVNIRLDGHGGELMNRATRNNVGRSMAVVFIEQKPVTRYTKQMVDGVEKEVAVPAFKEEKQIIS LATIQSPLGNQFRITGLDGPGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNIAKGVDASLWGMLFVSLFIIVIYRF FGVIATVALAFNMVMLVALMSILGATLTLPGIAGIVLTMGMAVDANVLIFSRIREELANGMSVQRAIHEGFNRAFTAILD ANLTSLLVGGILYAMGTGPVKGFAVTMSLGIITSMFTAIMVTRAMVNLIFGGRDFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 84 |
