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Name : glcD (NCGM2_6122) Accession : YP_005984316.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 6513627 - 6515126 bp Length : 1500 bp Strand : - Note : similar to GI:116053502; similar to PA14_70690 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGAACATCCTCTACGACGAGCGTCTGGACGGTCCGCTGCCGCAGGTGGACAAGGATGGCCTGCTGGCCGAGTTGCGCCT CCGCCTGCCCGACCTCGAACTGCTGCACGCCGCGGAAGACCTGCGTCCCTACGAGTGCGACGGACTCTCGGCGTATCGCT GCACGCCGTTGCTGGTGGCATTGCCGGAACGCATCGAACAGGTTCAGGGCCTGCTCGCCCTCTGCCATCGGCTGAAGGTG CCGGTCGTGGCGCGCGGTGCCGGCACCGGCCTGTCCGGCGGCGCGCTGCCGCTGGAGAACGGCGTGCTGCTGGTGATGGC GCGTTTCCGGCGGATCCTCGAGATCGATCCGCTGGGTCGTTTCGCCCGGGTCCAGCCTGGCGTGCGCAACCTGGCGATCT CCCAGGCCGCTGCCCCTCATGGTCTGTACTACGCACCGGACCCGTCCTCGCAGATCGCCTGCTCCATCGGCGGCAATGTC GCGGAGAACGCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTGCACAACCTGTTGCAGGTGGACATCGTGACCCT GGAAGGCGAGCGCCTGAGCCTGGGGTCCAGCGCCCTGGACAGCGCCGGCTTCGACCTGCTGGCGCTGTTCACCGGCTCCG AAGGGCTGCTCGGCGTGGTGGTGGAGGTCACCGTCAGGCTGTTGCCGCGCCCGCCGGTGGCGAAGGTCCTGCTGGCCAGC TTCGACGATGTGGAAAGCGCCGGGCGGGCGGTGGCCGACCTGATCGGTGCCGGCATCGTCCCGGCCGGGCTGGAAATGAT GGACAACCTGTCGATCCGCGCCGCCGAGGACTTCATCCATGCCGGCTATCCGGTCGACGCGGCGGCGATCCTGCTCTGCG AACTGGATGGCGTGGAAGCCGACGTGCACGAGGATTGCGAGCGGGTCCGCGAGCTGTTCGAGGCGGCTGGCTCCATCTCG GTGCGACAGGCCCAAGACGAGGCCGAGCGCCAGCGCTTCTGGGCCGGGCGCAAGAATGCGTTTCCGGCGGTCGGGCGGAT TTCCCCCGATTACTACTGCATGGACGGCAGCATCCCGCGCCGCGAGCTGCCGCGGGTGCTGCATGGCATCGCCGAGCTTT CGCGCGAATACGGCCTGCGGGTGGCCAACGTATTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCGACGCC AACCTGCCGGGCGAGCTGGAGCGCGCCGAAGCGCTGGGCGGCAGGATCCTCGAGTTGTGCGTGGCGGTAGGCGGCAGCAT CACCGGCGAACATGGCGTCGGCCGCGAGAAGATCAACCAGATGTGCGCTCAGTTCAATGCCGACGAGCTGACCCTGTTCC ACGCCGTGAAGGCGGCGTTCGACCCGGCCGGGCTGCTCAATCCCGGCAAGAACGTGCCCACCCTGCATCGCTGCGCCGAG TTCGGCGCCATGCACGTCCACCACGGTCGACTGCCGTTCCCCGAACTGGAGCGTTTCTGA Protein sequence : MNILYDERLDGPLPQVDKDGLLAELRLRLPDLELLHAAEDLRPYECDGLSAYRCTPLLVALPERIEQVQGLLALCHRLKV PVVARGAGTGLSGGALPLENGVLLVMARFRRILEIDPLGRFARVQPGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNV AENAGGVHCLKYGLTVHNLLQVDIVTLEGERLSLGSSALDSAGFDLLALFTGSEGLLGVVVEVTVRLLPRPPVAKVLLAS FDDVESAGRAVADLIGAGIVPAGLEMMDNLSIRAAEDFIHAGYPVDAAAILLCELDGVEADVHEDCERVRELFEAAGSIS VRQAQDEAERQRFWAGRKNAFPAVGRISPDYYCMDGSIPRRELPRVLHGIAELSREYGLRVANVFHAGDGNMHPLILFDA NLPGELERAEALGGRILELCVAVGGSITGEHGVGREKINQMCAQFNADELTLFHAVKAAFDPAGLLNPGKNVPTLHRCAE FGAMHVHHGRLPFPELERF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-178 | 80 |
