Gene Information

Name : PAGR_g1440 (PAGR_g1440)
Accession : YP_005992184.1
Strain : Pantoea ananatis PA13
Genome accession: NC_017554
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor FecI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1566198 - 1566749 bp
Length : 552 bp
Strand : -
Note : -

DNA sequence :

ATGGGGGACATTATGCCTGCCGACATGACCGATCGTTCAGATATATTAACGCTTATTTTTCGCAGCGATTATCGCTGGCT
GACGGATAAATTACGGCGTCGAATTAGCTACGGCACCATGGCAGAAGATATCGCTTCTGAAGCGTTTTTACGTCTGGCGG
CAATTCCGGAACTGCCCCACATTCGCGAGCCCAGGGCCATGCTGACGACACTGGCCCAGCGCGTGTTATATGAAAACTGG
CGACGCCGCGACCTTGAACAGGCTTATCTCAAAGCTCTGGCGGATAGCCCGCAGCATTGTCACCCCTCGCCCGAAGAACT
GGAGATGGTGATGGAGTCTTTACTGGCTATCGATCGCGCTCTGGATGGCTTGTCCGTAAATGCGAGAAAGGCCTTTTTGC
TCAACCAACTGGATGGCATGACCTATGCTGAAATCGCTAAAGAGCTTGGCGTATCAGCCAGTATGGTGCGTAAATATGTG
GCTAAAGCACTGACGAATTGTTATCTGGTGGCTCAGGGTCAATCTGACCCGATGGCGGGACATCACAAATGA

Protein sequence :

MGDIMPADMTDRSDILTLIFRSDYRWLTDKLRRRISYGTMAEDIASEAFLRLAAIPELPHIREPRAMLTTLAQRVLYENW
RRRDLEQAYLKALADSPQHCHPSPEELEMVMESLLAIDRALDGLSVNARKAFLLNQLDGMTYAEIAKELGVSASMVRKYV
AKALTNCYLVAQGQSDPMAGHHK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	6e-28	48

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
PAGR_g1440	YP_005992184.1	RNA polymerase sigma factor FecI	VFG1049	Protein	2e-28	48