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Name : secD (XFLM_06200) Accession : YP_006000539.1 Strain : Xylella fastidiosa GB514 Genome accession: NC_017562 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1351741 - 1353585 bp Length : 1845 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCTTGAATTACCCCGTTGGAAATATGTTCTTATTTTTGTTGTGCTTGTGTTGAGCACGCTGTACGCGTTACCAAACGT GTATCAGAAAGATCCTTCCGTGCAGATTACCGCCAATCGAGGCGGCCATATCGACGATGCATTCCGCCAGCAGGTGATGA CTGATCTTCAAGCATCCGGCATTGTGCCTAAGGCCGTGACCAAGGAGGGGGAGAGCCTGATGGTGCGCTTGATGTCGTTG GAGATGCAGACCCGTGCCAGCGATGTGTTGCGGGCTAAGGTGGGTGAGAATTACACCGTTGCATTGAATCTCGCTTCCAC TGTGCCAGATTGGTTGGCTAAGTTGGGTGGGCGACCGATGGTGTTAGGTTTGGATCTGGTTGGCGGTGTGCATTTCGCGC TTCAGGTGGATCAGAAGGCCGCTCTGAATAAACGTATGGATGCTTTTGTTGAGGAGGTACGTTCGACGTTGGGTAGCAAG CGTATTGGCTTCCGCATGGTCGAACGCCGTCCGGACAACACGATTCGAGTGACGTTTGATGATGATGCTCATCTCAATGA AGCACGTATGGTGTTGTTTAAGGAGCAAGTGGGGCTGAGTTATTCGGTATCCGGAAATACTTTGATTGCTCGTGTTTCTG AGAATGAGTTGCGTCAGATTGCCAGTGGTGCGGTTGAGCAAAATTTGACGACTCTGCGTAATCGCATCAATGAATTAGGC GTGGCCGAACCAATTATCCAACGTCAGGGGGATGATCGTATTGTTGTTGAGTTGCCTGGTGTTCAGGATACTGCTGAGGC TAAACGTCTGATAGGTGCGACTGCTACGCTGGAGTTTCGGGGTGTGGTCGACGGTGATGCCTATGAGGCAGTCCGTACTG GGAATGTTCCTCCTGAGGCCAGGGTGTATTACATACGCGGCACCAACCAGCCAGTTTTATTGAATAAGCGTGTGATTGTT TCTGGTGATGAGATGGTGAATGCCACTGTCGGTGTGGATGAGAACGGCATGCCAGCGGTCAATGTCACCCTCAGTAATGC TGCTGGTCAGCGTATGTTGGACTACACCCAGCGCAACCTTTACAAGCTGATGTCTGTGGTCTACATCGAGCGTATTCCGA CTGTGAGCATGGTTGATGGTAAGGAAGTGCGTGGCGTGCGGTTGAAGGAAGAGGCATTGTCCCCAACACGGATTGCTGGG GTATTTGGAAAAAACTTCCGTACCACCGGGTTGGAGAAGACTGAGGCTGAAAATCTGTCTAAATTGTTGCGCGCTGGTTC GTTGGCTGCACCGATGGATTTCGTTGAGGAATATGTGATCGGTCCTAGTTTGGGTGCAGAGAATGTAGAACGTGGTGTGA CTGCAGTGGTGTTTTCTTTCTTATTCACCCTGGTGTTTTTCACCATCTATTACCGCATGTTTGGTGTGATTACTTCATTG GCATTGCTGTTTAATCTGTTGATTGTGGTAGCTGTGATGTCGCTGTTTGGTGCAACCATGACTTTGCCGGGTTTTGCCGG GTTGGCGCTGTCGGTCGGGCTTTCGGTGGATGCTAACGTGTTGATCAACGAGCGTATCCGTGAGGAGTTGCGTCACGGGA TGCCTCCGAGATCGGCGATTGTGGCCGGTTACGACAAGGCGGGTAGCACGATTCTTGATGCCAATTTGACCGGACTGATT GTTGGTGTTGCCTTGTATGCTTTCGGAACCGGTCCTTTGAAGGGCTTTGCGTTGACTATGATTATCGGGATTTTCGCCTC AATGTTTACTGCGATTACGGTATCGCGTTCGCTCTCTGCGCTGATTTACGGTACGCGCAACAATCTCAAGTCTTTGGCTA TCTGA Protein sequence : MLELPRWKYVLIFVVLVLSTLYALPNVYQKDPSVQITANRGGHIDDAFRQQVMTDLQASGIVPKAVTKEGESLMVRLMSL EMQTRASDVLRAKVGENYTVALNLASTVPDWLAKLGGRPMVLGLDLVGGVHFALQVDQKAALNKRMDAFVEEVRSTLGSK RIGFRMVERRPDNTIRVTFDDDAHLNEARMVLFKEQVGLSYSVSGNTLIARVSENELRQIASGAVEQNLTTLRNRINELG VAEPIIQRQGDDRIVVELPGVQDTAEAKRLIGATATLEFRGVVDGDAYEAVRTGNVPPEARVYYIRGTNQPVLLNKRVIV SGDEMVNATVGVDENGMPAVNVTLSNAAGQRMLDYTQRNLYKLMSVVYIERIPTVSMVDGKEVRGVRLKEEALSPTRIAG VFGKNFRTTGLEKTEAENLSKLLRAGSLAAPMDFVEEYVIGPSLGAENVERGVTAVVFSFLFTLVFFTIYYRMFGVITSL ALLFNLLIVVAVMSLFGATMTLPGFAGLALSVGLSVDANVLINERIREELRHGMPPRSAIVAGYDKAGSTILDANLTGLI VGVALYAFGTGPLKGFALTMIIGIFASMFTAITVSRSLSALIYGTRNNLKSLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-102 | 44 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-102 | 44 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-102 | 44 |
