Gene Information

Name : XFLM_01225 (XFLM_01225)
Accession : YP_005999623.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Virulence
Product : type I secretion system ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 252941 - 255124 bp
Length : 2184 bp
Strand : +
Note : COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain

DNA sequence :
TTGCACATTAAGGATGGCAACATGACATACAAAAATCCCCTTGCAACGCAACAGAATCAACGCGCTTCCAATCCACAGCC
TGACAGCGCACTCCACGGCTTAGTGCTCCTTGCCCAATTCCATGGCATTGCGGCTGACCCCGTACAGATAGCGCATGACT
TCGGGCGCAGTGGCGAACCATTCGATGAAACAACCTTGCTACTGGCCGCCAAAAAACTTGGACTAAAAGCCAAAGTCGTC
ACCCAACCGGTCACCCGTATCGCAATGGCCGCATTACCTGCACTCGCACTGATCCCTGGAGGAACAGCATTTATCGTCGC
CAAAGTGACAGGCAACCAGATACTGATCCACGACCTGGCAGATCAACGGCCACGCACAATCTCACACGATGAATTTACCG
CACGCTACGCCGGCCGCTTACTCCAAGTCGCCTCCCGCGCATCGGTCCTAGGAAATCTGGCTAAATTCGACTTTAGCTGG
TTCATCCCCGCAGTGGTCAAATATCGCAAACTGCTGGCTGAAGTCTTTGCAGTGTCCTTATTTATCCAGATATTCGCACT
GGTGACACCCCTGTTCTACCAAGTCGTGATGGACAAAGTGCTCGTACACCAAGCACTCAGCACCCTTGAAGTCATTGTCG
TTGGCCTCATCTCCCTGGCCTTATTCGAAGTAGTACTCACCGCACTACGCACCCATGTCTTCGCACATACCACCAGCAAA
ATTGATGTTGAACTCGGCGCACGCTTATTCCGCCATCTATTAGCATTACCGTTAGCGTATTTTGAATCGCGCCGGGTTGG
CGACACCATCGCCCGCGTACGCGAACTAGAAAACATCCGCCACTTCCTCACCGGCCAAGCACTGACCTCCGTCTTAGACC
TCCTATTCACCGTCGTCTTTTTGTCCGTCATGTTTTGGTACAGCGGCTGGCTCACCCTGATTGTGGTGATCTCATTACCC
CTGTACGCACTGATCTCCGCATTCATCACCCCAGTACTCCGCAAACGTCTGGATGAAAAATTTGCACGCGGCGCAGACAA
CCAAGCATTTTTAGTGGAAACCGTCAGCGGCATTGGCACCGTTAAAGCAATGGCCGTAGACCCACGTGTCACCCGCACCT
GGGACAACCAACTGGCAGGCTACGTTGGTGCCAGCTTTAGCGTTACCAAAATTGCCACCCTCGGCCAACAGAGCGTTCAA
TTAGTACAGAAACTGACCAACGTCGCCGTATTATTTTGGGGCGCCAAACTGGTAATTGACGGACAACTGTCCCTCGGACA
ACTAATTGCCTTCAACATGTTGTCCGGCCAAGTCACTGCCCCCATCATCCGACTCGCCCAGCTATGGCAGGATTTTCAAC
AAGTCGGACTCTCTGTCGAACGACTCGGCGAAATTCTGAACACCCGTACCGAACTCCCCGGCAGCCGCATGACATTGCCG
CCCATCCAAGGGCGCATCACCTTCGAGCGCCTCATCTTCCGTTACCGTCCAGATACCCCCGACGTACTCTCCGGAATCGA
CCTAGACATCCAACCTGGCGAAGTCATCGGCATCGTAGGACGCTCCGGTTCAGGGAAAAGCACCCTGACAAAACTCGTAC
AGCGCATGTACGTCCCAGAACGCGGCCGCGTCTTGGTCGACAGCCACGACCTCTCATTGGCCGATCCCGCCTGGCTGCGT
CGCCAAATTGGCGTCGTACTGCAAGAAAATTTCCTGTTCAACCGCAGCGTCCGTGAAAACATCGCCATGGCCGACCCGGG
AATCCCCCTGGAACGCGTCATCCACGCAGCGACATTAGCCGGTGCCCATACCTTCATTTCTGAACTACCAGAAGGCTATG
ACACCAAGATTGGCGAACACGGTACAGGACTCTCCGGCGGCCAACGCCAACGCATCGCAATTGCCCGCGCCCTGATTGGC
GACCCACGCATCCTTATTTTCGATGAAGCCACCAGCGCACTCGACTACGAATCAGAACATGCCGTCATGCAAAACATGCG
AGCCATTTGCAAAGGCCGCACCGTTCTCATCATCGCCCACCGCCTCTCCACAGTCCGTAATGCCGATCGTATCGTCGTCA
TTGATAAAGGGAAAATCGTAGAAAGCGGCTCCCACGAAACACTCCTCAACCGCAACAACGGTCATTACGCCCACCTCTAC
CGACTCCAACAAGGGACCACATGA

Protein sequence :
MHIKDGNMTYKNPLATQQNQRASNPQPDSALHGLVLLAQFHGIAADPVQIAHDFGRSGEPFDETTLLLAAKKLGLKAKVV
TQPVTRIAMAALPALALIPGGTAFIVAKVTGNQILIHDLADQRPRTISHDEFTARYAGRLLQVASRASVLGNLAKFDFSW
FIPAVVKYRKLLAEVFAVSLFIQIFALVTPLFYQVVMDKVLVHQALSTLEVIVVGLISLALFEVVLTALRTHVFAHTTSK
IDVELGARLFRHLLALPLAYFESRRVGDTIARVRELENIRHFLTGQALTSVLDLLFTVVFLSVMFWYSGWLTLIVVISLP
LYALISAFITPVLRKRLDEKFARGADNQAFLVETVSGIGTVKAMAVDPRVTRTWDNQLAGYVGASFSVTKIATLGQQSVQ
LVQKLTNVAVLFWGAKLVIDGQLSLGQLIAFNMLSGQVTAPIIRLAQLWQDFQQVGLSVERLGEILNTRTELPGSRMTLP
PIQGRITFERLIFRYRPDTPDVLSGIDLDIQPGEVIGIVGRSGSGKSTLTKLVQRMYVPERGRVLVDSHDLSLADPAWLR
RQIGVVLQENFLFNRSVRENIAMADPGIPLERVIHAATLAGAHTFISELPEGYDTKIGEHGTGLSGGQRQRIAIARALIG
DPRILIFDEATSALDYESEHAVMQNMRAICKGRTVLIIAHRLSTVRNADRIVVIDKGKIVESGSHETLLNRNNGHYAHLY
RLQQGTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 62
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 62
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XFLM_01225 YP_005999623.1 type I secretion system ATPase VFG1557 Protein 0.0 62
XFLM_01225 YP_005999623.1 type I secretion system ATPase VFG1501 Protein 0.0 62
XFLM_01225 YP_005999623.1 type I secretion system ATPase VFG0907 Protein 0.0 62
XFLM_01225 YP_005999623.1 type I secretion system ATPase VFG0841 Protein 0.0 61
XFLM_01225 YP_005999623.1 type I secretion system ATPase VFG1269 Protein 0.0 59