Gene Information

Name : rnhA (XFLM_00110)
Accession : YP_005999418.1
Strain : Xylella fastidiosa GB514
Genome accession: NC_017562
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 26211 - 26663 bp
Length : 453 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGAAATTGATCAACGCGTACACGGACGGTTCTTGTCTTGGTAATCCTGGTCCTGGTGGTTGGGCTGTGTTGTTGCGTTA
TAAAAACAATGAGAAGGAGTTGGTTGGTGGTGAGCTTGATACGACCAATAATCGAATGGAGCTGATGGCTGCGATTATGG
CTCTGGAGCGGTTGAGTGAGCCTTGTCAGATCAAGCTTCATACTGATTCGCAGTATGTCCGCCAAGGGATCACTGAGTGG
ATGTCCGGTTGGGTACGGCGTGGTTGGAAAACTGCCGCCGGTGACCCGGTCAAGAATCGTGATCTATGGGAGCGGTTGTG
TGCTGCTACGCAGCGGCACATGATCGAATGGTGTTGGGTCAAGGCTCACAATGGTGATTCGGATAATGAACGGGTTGATG
TATTGGCCCGCGGCCAAGCGATGGCGCAGCGTAGTACGGTAGCAAGTCGATGA

Protein sequence :
MKLINAYTDGSCLGNPGPGGWAVLLRYKNNEKELVGGELDTTNNRMELMAAIMALERLSEPCQIKLHTDSQYVRQGITEW
MSGWVRRGWKTAAGDPVKNRDLWERLCAATQRHMIEWCWVKAHNGDSDNERVDVLARGQAMAQRSTVASR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 1e-37 58