Gene Information

Name : Y11_10171 (Y11_10171)
Accession : YP_006004516.1
Strain : Yersinia enterocolitica Y11
Genome accession: NC_017564
Putative virulence/resistance : Virulence
Product : putative ABC RTX toxin transporter, fused ATP binding/permease domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1043657 - 1045600 bp
Length : 1944 bp
Strand : -
Note : -

DNA sequence :
ATGGGAAATCATATTCATTCTTCTCTGGTCTGTGCTGCACGATTACTTCGTTTAGCAGGGGTTAATGTCGAGCCAGTAGA
AACATTGGGTAAAAATGCTGCTGTGGATCTTTCGACTTGGGGGACACTCGCCTCATTGCAACAATATTTATCACAGTTAT
CACGTGCGACATCGACTCGTTTTAAAGTGAAAAAACGGGCATTAAATAAAATAAAACCGGAGCAGTTACCACTGGCATTT
CGTGATGCAGAGGGCAGATTTATTTTGTTAGCACGATTAAATAATAATGAGGCATTGCTGCAACATTCTGATAGCAATAA
GCCACAAATAATTAGCTATCAATTGCTTAGTGAGATGTGGGGTGGGGTAGTACTCTATTGTAGCCATTCACGCTTTGATA
TCCGTTGGTTTATCCCCGTTTTATTGCGCCATCGTAAATCCTTGATCCAAGTGCTGGTGTTATCAATGCTATTACAGTTT
CTGGCATTGATATCACCACTTTTCTTTCAGGTTATTATGGATAAGGTCCTGGTGCATAATGCACTAACGACTCTCGACGT
GCTAATTATCGTATTATTGGTGGTAGGAGTATATGAGGTTGTACTGAAGTTTTTGCGTGAATATATTTTTAGTCATACCA
CAACTCGAGTGGATATTTTATTGGGAGGTAAATTATTTAATCACTTAATAAAATTACCATTAAGTTATTTTAAGCAACGC
CATGTAGGAAATATTGTTGCGCGAGTCTGTGAACTGGAAAATATTCGTGAGTTTATTACCGGGACAGCGCTTACCTTATG
TGTTGATGTTGTTTTTACCTTCATCTTATTTATTGTTATGTGGTGTATTTCGCCGCTTCTGACATTAATCATACTGGCCA
CACTGCCGCTATATCTGTTACTGGCGGCATTAACCACCCGTCCCTTGCAAAAGAAAGTTGAAGTGTTATGCAGTTGTGCG
GCTCAGAATGGTGCATTTTTAACCGAAACGGTCTCCGGAGTTGAAACTGTTAAAAGCCTGGCCTTAGAACCGCAGATGCA
GCAGCGGTGGGAGACGCAAACGCGGGACTACGCTCAAGCTAATTTTCAGGTGCAAAACCTGCAAAACTTCAGCAGCCAGT
GCGCTCAGTTACTGCAAAAATTAGCCAGTGCGCTAGTGATTGTTATTGGGGCATATCAAGTCATGTCTGTGCAACTGAGT
ATCGGGCAGTTAATCGCTTTTAATATGCTGGCGTTACAAGCATTAATGCCAATGAGTAAGTTGGTTGATTTATGGCAGCA
GAGTATTCGGGCGAAAGTTGGGTTGATGCTGATATCCGATATTTTAAGTTTGCCGGTCGAGCAAGCCACGGGGGGCGCTC
CGTCTCATCGCCAAATTAACGGTGATATCACCTTGGATAATGTGGTTTTCCGTTATCGGCCCGATCTTGATCCTGTATTA
CGTCATTTCTCATTATCACTGCGCGCGGGAGAGCATATCGGGCTGGTCGGCCCGTCGGGTTCAGGCAAAAGTACGGTCGC
GCGGCTATTACAGCGCCTTTATATCGCTGAACAGGGGGTTATTAATATTGATGGTTACTCGATAAATCATTTCTCTCCTG
AGTATCTACGTCGTCAGGTCGGTGTGGTCATGCAGGAAAACTACCTGTTTAACCGCACCGTTCGCGAAAATATTGCCTAT
TCTCGGCCAACCGCTTCACTGAGTGATGTCGTTGATGCGGCCTGTCTGGCGGGCGCGCACGATTTTATTCTGGCCTTGCC
GCTAGGGTATGACACCGTGCTGTCTGAAGGTGGGACATCCCTTTCTGGTGGGCAACGTCAGCGTATTGCGATTGCTCGTA
CTCTACTGGCCAATCCCCGTGTATTGATTTTTGATGAGGCAACCAGTGCTCTGGATGATGAGTCGCAAGCTGAAGTTCAG
AAAAGCAAGAATTGGTTAAGTTAA

Protein sequence :
MGNHIHSSLVCAARLLRLAGVNVEPVETLGKNAAVDLSTWGTLASLQQYLSQLSRATSTRFKVKKRALNKIKPEQLPLAF
RDAEGRFILLARLNNNEALLQHSDSNKPQIISYQLLSEMWGGVVLYCSHSRFDIRWFIPVLLRHRKSLIQVLVLSMLLQF
LALISPLFFQVIMDKVLVHNALTTLDVLIIVLLVVGVYEVVLKFLREYIFSHTTTRVDILLGGKLFNHLIKLPLSYFKQR
HVGNIVARVCELENIREFITGTALTLCVDVVFTFILFIVMWCISPLLTLIILATLPLYLLLAALTTRPLQKKVEVLCSCA
AQNGAFLTETVSGVETVKSLALEPQMQQRWETQTRDYAQANFQVQNLQNFSSQCAQLLQKLASALVIVIGAYQVMSVQLS
IGQLIAFNMLALQALMPMSKLVDLWQQSIRAKVGLMLISDILSLPVEQATGGAPSHRQINGDITLDNVVFRYRPDLDPVL
RHFSLSLRAGEHIGLVGPSGSGKSTVARLLQRLYIAEQGVINIDGYSINHFSPEYLRRQVGVVMQENYLFNRTVRENIAY
SRPTASLSDVVDAACLAGAHDFILALPLGYDTVLSEGGTSLSGGQRQRIAIARTLLANPRVLIFDEATSALDDESQAEVQ
KSKNWLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 4e-103 49
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 2e-103 49
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 2e-103 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_10171 YP_006004516.1 putative ABC RTX toxin transporter, fused ATP binding/permease domains VFG0841 Protein 7e-102 49
Y11_10171 YP_006004516.1 putative ABC RTX toxin transporter, fused ATP binding/permease domains VFG1501 Protein 1e-103 49
Y11_10171 YP_006004516.1 putative ABC RTX toxin transporter, fused ATP binding/permease domains VFG0907 Protein 2e-103 49
Y11_10171 YP_006004516.1 putative ABC RTX toxin transporter, fused ATP binding/permease domains VFG1557 Protein 1e-103 49
Y11_10171 YP_006004516.1 putative ABC RTX toxin transporter, fused ATP binding/permease domains VFG1269 Protein 4e-103 48