Gene Information

Name : Sput200_0194 (Sput200_0194)
Accession : YP_006008149.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 208175 - 208921 bp
Length : 747 bp
Strand : -
Note : KEGG: shw:Sputw3181_0186 heme exporter protein CcmC; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein

DNA sequence : 
ATGTGGAAATGGTTACACCCTTATGCGGATCCTGAACGCGCATATAAATTATCAGGAACATTATTCCCATGGTTTGCAAT
CTTGGCTTGTCTGTTTATTGCAGTAGGGACTATTTGGGGATTAATCTTCGCCCCGACAGATTATCAACAGGGTGATAGTT
ATCGCATCATCTTTATCCATGTACCTGCAGCATCAATGTCAATGGCAGCCTACATGGGCATGGCAACTGCAGCATTTATT
GGTCTGGTATGGCAAGTCAAGCTCGCTGATTGGGCCGCAGCATCTATTGCACCTATTGGTGCGGTGATTACGTTTATTGC
ACTGTTCACAGGAGCTGCATGGGGTAAGCCTATGTGGGGAACTTGGTGGGTATGGGATGCTCGTCTAACCTCAGAGCTTG
TACTGCTCTTCTTATATTTAGGCGTAATATCATTATATGCCTCATTCGAAGATAAAGTGCTTGCGGCTCGTGCTGCAGGG
ATCTTAGCGATCGTTGGTGTCATTAATATCCCTATTATCAAATACTCAGTTGAATGGTGGAGCTCATTACATCAGCCATC
AACTATACGCATTACTGAAAAATCAACGATGCCAGCAGAGATGTTGTATCCACTTTTAATCAATATTTTAGGTTTCGGCC
TTATGATAGGCGCGATTACTATCGTCAGATTCAAAGCTGAAATTTTAGCAAGAAACGGAATGCGCCCTTGGGTGCGTGAA
CTTGCTAAGGCTGAGGAGGTCAAATAA

Protein sequence : 
MWKWLHPYADPERAYKLSGTLFPWFAILACLFIAVGTIWGLIFAPTDYQQGDSYRIIFIHVPAASMSMAAYMGMATAAFI
GLVWQVKLADWAAASIAPIGAVITFIALFTGAAWGKPMWGTWWVWDARLTSELVLLFLYLGVISLYASFEDKVLAARAAG
ILAIVGVINIPIIKYSVEWWSSLHQPSTIRITEKSTMPAEMLYPLLINILGFGLMIGAITIVRFKAEILARNGMRPWVRE
LAKAEEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 5e-42 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0194 YP_006008149.1 heme exporter protein CcmC VFG1856 Protein 3e-44 49