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Name : Sput200_0199 (Sput200_0199) Accession : YP_006008154.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 212597 - 214576 bp Length : 1980 bp Strand : + Note : KEGG: shw:Sputw3181_0191 cytochrome c-type biogenesis protein CcmF; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein DNA sequence : ATGATCCCAGAACTTGGACACTTTTCGTTGATAATCGGAGTGGCTTTTGCCTTTCTGCTCGTCAGCGTTCCCCTTATTGG TGTTGCCCGTAAAGATCAATATCTTGTGAGGTATGCTTGGCCGTTAGCTTACGGAATGTTCTTTTTTATCAGTTTATCCG TTGTTTCACTTGGTTATAGCTTTGCTGTTGATGATTTCTCCGTCGCTTATGTGGCTCATCATTCCAACTCCCAGTTACCT ATCTTCTTTAAGATTGCGGCCGTATGGGGCGGTCACGAAGGGTCGCTGTTATTTTGGGTGTTTTCATTAGCAACTTGGGC CGCTTCTGTTGCTTTATTCAGTAAAGGTTTAGAAGAAGTGTTCACCGCACGTGTACTTGCAGTTCTGGCAGTAATCGTGA TTGGTTTTAGTTTGTTTATGCTGCTTACATCAAGCCCATTTGAGCGTTTATTTCCCATGCCTGCAGAAGGTCGTGACTTA AACCCAATGCTGCAGGATGTGGGCTTAATATTCCATCCACCTATGCTGTATTTGGGCTATGTTGGTTTTTCTGTAAGCTT TGCTTTTGCTATTGCTGCATTGATGAGTGGACGTCTTGATTCTGCATGGGCTCGTTGGTCTCGTCCTTGGACCTTGGCTG CATGGGTATTCCTCACGGGCGGTATTTCTTTAGGCTCTTGGTGGGCATATTACGAATTAGGCTGGGGTGGTTGGTGGTTC TGGGATCCTGTTGAGAACGCCTCTTTCATGCCTTGGTTAGTGGGTACTGCGCTTGTGCACTCTTTGATTGTGACCGAGAA ACGCGGCGCCTTCCGTAACTGGACGGTATTGCTTTCCATCTTTGCTTTCTCTTTAAGCTTGCTTGGTACCTTTATTGTTC GCTCTGGCGTATTAACCTCAGTGCATTCATTTGCGGCAGATCCCAGCCGTGGTATGTTCATTCTGTTGTTACTTGGTTTA GCCATTGGTGGTTCTTTAACACTCTTTGCTTTCCGTGCCAGCGAAATGAGTAGCCCAGCACGTTTCGAGTTGAAGTCTAA AGAAACTATGCTGCTGATTTGTAACGTTCTGTTGACTGTTGCTACAGGTACTGTGTTATTAGGCACTTTATACCCACTGC TGATTGATGCACTTGGTATGGGTAAAATTTCTGTAGGGCCTCCATATTTCAATGCTGTATTTGTGCCTATCGTTTTAGTG TTGTTTGCTTTTATGGGTGTAGGTCCAATTATTCGTTGGAAAAAATCGAAGGCCGGCGAACTTAGACGCCAACTGCTGAT CCCTGCTCTGGTTTCTGTCGCGATAGGGATAGTGACACCATTTATAGTTGATGGTGCATTTAACGCGTGGGTTGCATTTG GTATTGCAGCGGCGGTATGGATCATACTTGCCACAGCAAGAGCCGCTTATAATATTGTTAAACCTAAAGAAGGTGATATT AGTGTTGCTCGTATGGGGCGCAGTCAATTTGGGATGATCTTGGCCCACTTCGGCATTGCCGTCTCTGTTATTGGTGCCAC TATGGTATCTAACTATTCAGTTGAGAAAAGTGTCCGTATGGGACCAGGGGTTAGCCAGGAGTTAGCTGGTTATACCTTTA AGTATTTAGAGACAAAAAATGTCGTTGGCCCAAATTACACTGCTCAGCAGGGGCAAATTGAAATCTATAAAGATGACAAA TTGTTAACACTGCTAAAGCCTGATCGCCGTCAATACAATGTGCGAACCATGGATATGACTGAAGCTGGTATTGATTGGGG TCTGTTCCGTGATTTGTATGTGACTATGGGTGACCCTATCAGTGCAACAGAGTTTGCGGTACGTTTGAACTATAAACCCT TTGTCCGTTGGTTGTGGTTTGGATCGATTTTTATGATGATTGGTGGTTTCTTCGCTGCATCAGATAAGCGTTATCGCTCA AAAGTGGCGGCGATTGTTAAGCCACAAGTAGATAAAGCTAAACTGGCAACCGCTCAATAG Protein sequence : MIPELGHFSLIIGVAFAFLLVSVPLIGVARKDQYLVRYAWPLAYGMFFFISLSVVSLGYSFAVDDFSVAYVAHHSNSQLP IFFKIAAVWGGHEGSLLFWVFSLATWAASVALFSKGLEEVFTARVLAVLAVIVIGFSLFMLLTSSPFERLFPMPAEGRDL NPMLQDVGLIFHPPMLYLGYVGFSVSFAFAIAALMSGRLDSAWARWSRPWTLAAWVFLTGGISLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLTSVHSFAADPSRGMFILLLLGL AIGGSLTLFAFRASEMSSPARFELKSKETMLLICNVLLTVATGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLV LFAFMGVGPIIRWKKSKAGELRRQLLIPALVSVAIGIVTPFIVDGAFNAWVAFGIAAAVWIILATARAAYNIVKPKEGDI SVARMGRSQFGMILAHFGIAVSVIGATMVSNYSVEKSVRMGPGVSQELAGYTFKYLETKNVVGPNYTAQQGQIEIYKDDK LLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPISATEFAVRLNYKPFVRWLWFGSIFMMIGGFFAASDKRYRS KVAAIVKPQVDKAKLATAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 2e-133 | 54 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-115 | 50 |
