Gene Information

Name : Sput200_2252 (Sput200_2252)
Accession : YP_006010165.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2567403 - 2567609 bp
Length : 207 bp
Strand : +
Note : TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: shn:Shewana3_1751 cold-shock DNA-binding protein family protein; SMART: Cold shock protein

DNA sequence :
ATGGCAAGCGGAACTGTTAAATGGTTCAACAACGCCAAAGGATTCGGGTTTATTTGCCCTGATCAAGGTGGTGAGGACGT
TTTTGCACACTATTCTACCATTGAAATGGAAGGCTATAGAACTCTAAAAGCAGGCCAACCCGTTCAATTTGAAGTAGAGC
AAGGTCCAAAAGGGATGCACGCTTCAGCCATTTCACCAACAAAATAA

Protein sequence :
MASGTVKWFNNAKGFGFICPDQGGEDVFAHYSTIEMEGYRTLKAGQPVQFEVEQGPKGMHASAISPTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-14 54