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Name : Sput200_2506 (Sput200_2506) Accession : YP_006010417.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2881190 - 2883040 bp Length : 1851 bp Strand : - Note : manually curated; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; KEGG: shw:Sputw3181_1526 preprotein translocase subunit SecD; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : GTGTTAAATAAATACCCAATGTGGAAAAACATTATGGTGATGCTTATCATCGCCATAGGTTGTTTCTATGCCGTACCGAA CCTTTTTGGTGAAGATCACGCGGTGCAAGTGGTGGCGACTCGTGGTGCAGAAGTAACTGCATCTACCCAAGCCAGAGTGA ACGAGCTGTTAGCCGGTAAGGGCATTGCGGTAAAGCGCTCTGAGCTTGAAAAAGGCCAGTTGTTGGTTCGTGTGCAGAAC GCGGATCAACAATTATTAGCAAAAGAAACGATCGCAGAAGATTTAGGTGATAAGTTTAGTGTTGCACTTAACTTAGCTCC AGCAACACCGCAATGGCTCGAGTCTATGGGTGGTAGCCCTATGAAACTCGGTCTCGATCTTCGCGGCGGTGTGCACTTCT TAATGGAAGTGGACATGGGCGAAGCGATCCGCAAGATGGAAGAGGCTAAGGTTGCTGACTTTCGTGCACAATTACGTGAA GAAACAATCCGTTATGCGGGCATTCGTGTTAATGCCTCTGGGATTGAGATTAAATTCCGTGATGCTGAAAGTTTAGCCAG TGCAGAACGTTTCCTTAAATCTCGCAGTAACGATATGGTCTTCACTGATGTGAGCAAGGGTGATGATTTTGCCCTGCAAG CGGTGATGAGTGAAGCTTATCTTAAGCAGGTTAAAGAAGAAGCACTGCAACAAAACATTACCACTATTCGTAACCGTGTT AATGAGTTAGGTGTTGCTGAACCTGTAGTACAGCGCCAAGGTGCAGAGCGTATTATCGTTGAACTACCTGGTGTACAAGA TACGGCTCGCGCTAAAGAAATTTTAGGGGCAACCGCATCGATTGAATTCCATATGGTGGATGACAAAGCCGATCCTAATG CCGCGCAATCAGGACGTATCTCTGCAGGCTCTGAAGTGTATCAACGTCGTGAAGGCGGCCAAGTCGTATTGAAAAAAGAA GTGATGCTAACGGGAGATCATATCACCGGCGCCCAACCTAGCTTTGATCAATACAGTCGCCCACAGGTGAGCATTAATCT TGACGCTAAAGGCGGTACCATTTTCTCTAATGTGACTAAGGACAACATAGGCAAACCTATGGCGACCTTATTCATTGAAT ATAAAGACAGTGGTGAACGTAACGCCGATGGCAGCGTGAAAATGCAGAAAATCCAAGAAGTGATTTCTGTGGCAACCATT CAAGCCCGTTTAGGTCGTAACTTTGTGATCACAGGTTTAAGCCACGGTGAAGCACAAAACCTTGCTTTGCTGTTACGCGC TGGAGCTTTGATTGCACCTGTATCCATTGTTGAAGAACGTACCATTGGTCCAAGTTTAGGCGCTGAAAATATTGAGAATG GTGTTCAAGCTATGGTGTGGGGTATGGCCGTCGTCTTAATTTTCATGCTGGTGTACTACCGCGGTTTTGGGCTTATCGCT AACCTCGCGTTAACTGCAAACTTAGTCATGGTTGTAGGCGTGATGTCGATGATCCCAGGCGCAGTATTGACCCTTCCCGG TATTGCGGGGATGGTGTTGACAGTGGGGATGGCAGTTGATGGTAACGTACTCATTTATGAGCGTATTCGTGAAGAACTTC GTGCAGGACGTAGTGTACAGCAGGCCATCCATGAAGGTTATGGTAATGCGTTTTCAACCATTGCCGATGCGAACATCACG ACTTTCCTTACCGCATTAATTTTATTTGCTGTGGGGACTGGTGCTGTTAAAGGCTTCGCGGTGACCTTGATGATAGGTAT TGCGACTTCCATGTTTACCTCTATCGTGGGTACTCGCTCCATCGTTAATGCGATTTGGGGTGGTAAGCGCGTGAAGACAC TGTCTATCTAA Protein sequence : MLNKYPMWKNIMVMLIIAIGCFYAVPNLFGEDHAVQVVATRGAEVTASTQARVNELLAGKGIAVKRSELEKGQLLVRVQN ADQQLLAKETIAEDLGDKFSVALNLAPATPQWLESMGGSPMKLGLDLRGGVHFLMEVDMGEAIRKMEEAKVADFRAQLRE ETIRYAGIRVNASGIEIKFRDAESLASAERFLKSRSNDMVFTDVSKGDDFALQAVMSEAYLKQVKEEALQQNITTIRNRV NELGVAEPVVQRQGAERIIVELPGVQDTARAKEILGATASIEFHMVDDKADPNAAQSGRISAGSEVYQRREGGQVVLKKE VMLTGDHITGAQPSFDQYSRPQVSINLDAKGGTIFSNVTKDNIGKPMATLFIEYKDSGERNADGSVKMQKIQEVISVATI QARLGRNFVITGLSHGEAQNLALLLRAGALIAPVSIVEERTIGPSLGAENIENGVQAMVWGMAVVLIFMLVYYRGFGLIA NLALTANLVMVVGVMSMIPGAVLTLPGIAGMVLTVGMAVDGNVLIYERIREELRAGRSVQQAIHEGYGNAFSTIADANIT TFLTALILFAVGTGAVKGFAVTLMIGIATSMFTSIVGTRSIVNAIWGGKRVKTLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-125 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-125 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-125 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-125 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-125 | 48 |
