Gene Information

Name : SDE12394_10020 (SDE12394_10020)
Accession : YP_006014000.1
Strain : Streptococcus dysgalactiae ATCC 12394
Genome accession: NC_017567
Putative virulence/resistance : Virulence
Product : bacterial microcompartments family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1972096 - 1972395 bp
Length : 300 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence :
ATGAGATATCATGGTGGACAAGCTTTGGGGCTGGTAGAAACGGTTGGTTTGGTACCAGCTTTGGAAGCCTGTGACAAAAT
GTTGAAAGCCAGCAATGTCAAGCTGGTGTCTTATGAAAATGTAGGATCTACTCTCGTGACAATCATGGTGGTGGGAGATG
TGGCAGCAGTGGAAGCTTCAGTTGAGGCAGGAGCACGTGCTGCTGCAGCAATCGGAAAATTGACCTCTCATAATGTGATG
CCAAGACCAATTTCTGCTGTTGGGGATATTGTGTCAGTTCACGATATTGATAATGGATAA

Protein sequence :
MRYHGGQALGLVETVGLVPALEACDKMLKASNVKLVSYENVGSTLVTIMVVGDVAAVEASVEAGARAAAAIGKLTSHNVM
PRPISAVGDIVSVHDIDNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 3e-08 55
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 54
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 9e-08 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDE12394_10020 YP_006014000.1 bacterial microcompartments family protein VFG1597 Protein 1e-08 55
SDE12394_10020 YP_006014000.1 bacterial microcompartments family protein VFG1596 Protein 5e-09 54
SDE12394_10020 YP_006014000.1 bacterial microcompartments family protein VFG1598 Protein 4e-08 51