Gene Information

Name : Sbal175_4020 (Sbal175_4020)
Accession : YP_006022548.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Unknown
Product : Cytochrome c-type biogenesis protein ccmE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4736936 - 4737424 bp
Length : 489 bp
Strand : +
Note : KEGG: shw:Sputw3181_0184 cytochrome c-type biogenesis protein CcmE; HAMAP: CcmE/CycJ protein; PFAM: CcmE/CycJ protein

DNA sequence :
GTGAACCCAAGACGCAAAAAAAGACTGACGTTAGCAGTGGCATTAATCGGTGGTGTTGCCGCGATTACTTCGCTTTTGCT
TTATGCGCTGAACTCCAACTTAAACTTATTCTATACACCGTCTGAAATTGTCCACGGCAAAACAGATACTGGCGTCAAAC
CAGAAATTGGCCAACGCATTCGTGTCGGCGGCATGGTAACAGTTGGTTCTATGGTGCGAGATCCTAAGAGCTTACATGTG
CAGTTCGCAGTGCATGACTCTCTAGGCGGCGAAGTACTGGTCACCTATGACGATCTACTGCCCGATCTATTCCGTGAAGG
ACAAGGTATTGTGGCGCAAGGCGTGCTAAGTGCTGATGGTAAGCTAGAAGCGACTGAAGTACTGGCTAAGCATGATGAAA
ACTACATGCCGCCAGAAGTTGCCGAAGCCATGGGCCAAAAGCACGAAAAGTTGGATTACAGCCAACAAAAGGCACCAGAC
ACAAAGTAA

Protein sequence :
MNPRRKKRLTLAVALIGGVAAITSLLLYALNSNLNLFYTPSEIVHGKTDTGVKPEIGQRIRVGGMVTVGSMVRDPKSLHV
QFAVHDSLGGEVLVTYDDLLPDLFREGQGIVAQGVLSADGKLEATEVLAKHDENYMPPEVAEAMGQKHEKLDYSQQKAPD
TK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmE YP_217242.1 cytochrome c-type biogenesis protein CcmE Not tested SPI-12 Protein 1e-30 56
cycJ / ccmE AAN62107.1 putative cytochrome C-type biogenesis protein CycJ Not tested PAGI-2(C) Protein 9e-21 44