Gene Information

Name : Sbal175_4186 (Sbal175_4186)
Accession : YP_006022712.1
Strain : Shewanella baltica BA175
Genome accession: NC_017571
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4922336 - 4922842 bp
Length : 507 bp
Strand : +
Note : KEGG: ppg:PputGB1_0695 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGACGTCGGTCAATATTTCTTCTCCTATCAATAACCTATATAGAGATAACCAGTTTTGGCTACGCGGCTGGCTATACTC
ACGCGTGGGTTGTTCAGAAACAGCGGCCGACCTAGCCCAAGATACATTTCTACGTTTGTTAAAAACCGGAAATTTACCGC
CTTCAGGCGAATCGCGGCGTTTTTTAACCCGCATTGCCAAAGGATTGATGATTGACGCTTATCGTCGGCAGAAGATTGAA
GAAGCCTACCTAGAAAGTTTGAGCTTGATGCAAGAAACATTCATTCCTGGGCCAGAAATCCATCATGTCATCATTGAAAC
ACTCGCTGAAATTGCCGTTATGCTCGATAACTTGCCGGATAATGTGCGCTTGACGCTGTTACTGCGCCAGATAGAGGGTT
TAAGCTATGCCGACATTGCTAAGCAACTATCAGTTTCTGTTTCATCGGTAGAAAAGTACGTTGCGCGAGGCTTAGCGGCC
TGCTGCCTCGCGCTGGAATCCTATTAG

Protein sequence : 
MTSVNISSPINNLYRDNQFWLRGWLYSRVGCSETAADLAQDTFLRLLKTGNLPPSGESRRFLTRIAKGLMIDAYRRQKIE
EAYLESLSLMQETFIPGPEIHHVIIETLAEIAVMLDNLPDNVRLTLLLRQIEGLSYADIAKQLSVSVSSVEKYVARGLAA
CCLALESY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 2e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal175_4186 YP_006022712.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 9e-31 42