Gene Information

Name : SerAS13_1479 (SerAS13_1479)
Accession : YP_006024337.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Virulence
Product : integral membrane sensor signal transduction histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1588771 - 1590237 bp
Length : 1467 bp
Strand : -
Note : KEGG: spe:Spro_1507 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region,

DNA sequence :
ATGAAAAATCTCACGCTGACACAGCGCCTGACGCTGATCTTCGCCCTGCTGCTGCTGCTCTGCTGCGCCTTCTCCGGCTG
GCTGCAGGTGCGCAGCAACACCCAGTTCAGCCAGGCGACCATTCAACGGCTGTCCGGCAACCTGGCGCAGCATATCGCCG
CCAGCAACCCGCTGCTGGGCCAGGACGGTTTGAACCCGCAGTCGGTGCATACTCTGTTCGATCAGCTGATGGCGGTGAAT
CCCAGCGTAGAGGTCTATCTGCTCGACAAAGGGGGCAATATCATCGGCAACGCCGCGCCGGCCGGCCACCTGAAACGGCA
AAAGGTCGACTTGTTGCCGTTGCAGGCGCTGCTCGACGGCGCACAAATGCCGGTGTACGGCGACGATCCGCGCAGCGCCG
ACGGAGAAAAAGTGTTCAGTGTCGCCCCGCTGAAGGTTGACGGCCGGGTCGAAGGTTACCTGTATGTAGTGCTGCTGGGC
GAGAACTACAGCGCACTGGCCAGCAACGCCCAGCTCAGCTCGGCGATCCGGCTGGCACTGTGGTCGATGGGGCTGGTGGT
GCTGTTCGGCCTGCTGGCCGGCGGTTTCGCCTTCCGCTGGGTCACGCGGCCAATTCGCCAACTCACTCGCCAGGTCAGTG
CGCTGGACAACGGCGGCATCGCCGCGGTGCAAGCCTATGCGGCGCAACCGCTTCCCAACGCCGGGCGAGATGAAGTCAGC
CAGTTGCACCAGGCGTTTCGCGGCATGGCACAGCGTCTTGCCGAACAGTGGCAGTCGCTCTCTCAGCAGGATCAGCAGCG
GCGCGAATTTATCGCCAACATCTCTCACGACCTGCGCACCCCGCTCACCTCGCTGCACGGCTATCTGGAAACGCTGTCGG
TAAAATCCGCCACGCTGAGCGAAAACGATCGCCGGCGCTATCTGGAGATCGCGCTGGCGCAGAGCCGCAAGGTGGGCAAG
CTGGCGCAAGAGCTGTTCGAGCTGGCGCGGCTGGAGTACGGCGTGGTGAAACCGCAAAAAGAGCCGTTCTCTCTCAGTGA
ACTGGTGCAGGACGTATTCCAGAAATTCGAGCTGGCGACCGAAGCGCGCCACCAGCGTTTGCACGCTGACATCGCCCCCG
GCATTCCGCTGGTGTTCGCCGATCTGAGCATGATCGAGCGGGTGCTGACCAACCTGCTGGACAACGCCATTCGCCATACG
CCGCAGGGCGGTGAAATCGGCGTGCGGCTGTGGCAACAGGAAGACAAAGTGCTGGTACAGGTCAACGACAACGGCCCCGG
CATTCCGCAGGAGCTACGCGCCGATCTGTTCGTGCGGCCGTCTATCCTGAGTGGGACACGGCGCCACACCGGCGGGCTGG
GGTTGATGATCGTCAGGCGTATTCTGCAGTTGCACGGCAGCGATATTCAGTTGGTGGATCAAGCGCAAAGCGGTGCCTGC
TTCCGCTTTGCCATACCACCGCGCTAG

Protein sequence :
MKNLTLTQRLTLIFALLLLLCCAFSGWLQVRSNTQFSQATIQRLSGNLAQHIAASNPLLGQDGLNPQSVHTLFDQLMAVN
PSVEVYLLDKGGNIIGNAAPAGHLKRQKVDLLPLQALLDGAQMPVYGDDPRSADGEKVFSVAPLKVDGRVEGYLYVVLLG
ENYSALASNAQLSSAIRLALWSMGLVVLFGLLAGGFAFRWVTRPIRQLTRQVSALDNGGIAAVQAYAAQPLPNAGRDEVS
QLHQAFRGMAQRLAEQWQSLSQQDQQRREFIANISHDLRTPLTSLHGYLETLSVKSATLSENDRRRYLEIALAQSRKVGK
LAQELFELARLEYGVVKPQKEPFSLSELVQDVFQKFELATEARHQRLHADIAPGIPLVFADLSMIERVLTNLLDNAIRHT
PQGGEIGVRLWQQEDKVLVQVNDNGPGIPQELRADLFVRPSILSGTRRHTGGLGLMIVRRILQLHGSDIQLVDQAQSGAC
FRFAIPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3564 NP_755439.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-94 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS13_1479 YP_006024337.1 integral membrane sensor signal transduction histidine kinase VFG1701 Protein 3e-94 50