Gene Information

Name : SerAS13_3579 (SerAS13_3579)
Accession : YP_006026409.1
Strain : Serratia sp. AS13
Genome accession: NC_017573
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3814019 - 3815989 bp
Length : 1971 bp
Strand : -
Note : KEGG: spe:Spro_3386 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein

DNA sequence :
ATGATGCCGGAAACGGGAAGTTTTCTGCTGTGCCTGGCATTGGCGATTTCGCTGCTGCTGAGCATTTATCCACAGTGGGG
CGCGGCGCGTCAGGATAGCCGCATGATGGCGGTGGCGCGCCCGCTGACCTACGGCATGTTCGCCGCCATTGCGCTGGCGT
TCATCTGCCTGGTGCACGCCTTTGTCGTGAATGATTTTACCGTGGCCTATGTGGCCGCCAACTCCAACAGCCAACTGCCG
GTGTATTACCGCATCGCCGCCACCTGGGGCGCGCATGAGGGATCGCTGCTGCTGTGGGTGCTGTTGCTCAGTTGCTGGTC
ATTGGCGGTGGCGCTGTGCAGCCGTTCAATGCCGCAGGATGCGGTGGCGCGCGTGTTGTCGGTGATGGGCATGATCACCG
CAGGTTTCCTGCTGTTTATCATCATGACCTCCAACCCGTTTACCCGTACGCTGCCGAACTTTCCGATCGACGGCAGTGAC
CTCAATCCGCTGCTGCAGGATATCGGCCTGATCTTCCATCCGCCGCTGTTGTACATGGGTTATGTCGGCTTCTCGGTGGC
GTTTGCCTTCGCCATCGCCTCACTGATGGCCGGCCGGCTGGATACCGCCTGGGCGCGCTGGTCGCGGCCCTGGACCACGG
CGGCCTGGGTGTTCCTCACCCTGGGGATCGTGCTGGGTTCCGCCTGGGCCTATTACGAACTGGGTTGGGGCGGCTGGTGG
TTCTGGGATCCGGTGGAAAACGCGTCCTTCATGCCTTGGCTGGCCGGTACGGCGCTGATGCACTCGCTGGCGGTGACCGA
AAAACGCGGCACCTTCAAGGCCTGGACGGTGCTGCTGGCCATTACCGCCTTCTCGCTGTGCCTGCTGGGTACCTTCCTGG
TGCGTTCCGGCGTGCTGGTTTCGGTGCACTCTTTTGCCTCCGACCCGGCGCGCGGCATGTTTATCCTCGCCTATCTGGTG
ATCGTGATCGGTGGTTCTCTGCTGCTTTACGCGGTCAAGGGCGGGCAGGTACGCAGCCGGGTGCAGCATGAAACCTTCTC
GCGCGAAACCTTCCTGCTGGGCAATAACGTGCTGTTGATTGCCGCCATGCTGGTTGTGCTGCTGGGCACGTTGCTGCCGC
TGGTGCACAAACAGCTGGGCCTGGGCAGCATTTCTATCGGTGAACCCTTCTTCAATACCATGTTCACCTGGCTGATGGCG
CCGATGGCGCTGCTGATGGGCATCGGCCCGCTGGTGCGCTGGCGTCGCGATGAACCGACCAAGCTGTGGCGCCGCTTGAG
CGTGGCGCTGGCGATCACGCTGGTGCTGTCGATCCTGCTGCCGTGGCTGTTACAAGACAGCATCGCCGGCATGACGGTGG
TCGGGCTGATCATGGCGGTGTGGGTGATTATTCTGACGCTGATGGAATTGCATGAGCGCGCTACCCATCGCCACGGTTTC
TGGCGCGGCCTGAGCCACCTTTCCCGCAGCCACTGGGGCATGGTGCTGGGCCACCTCGGGGTCGCGGTGACGGTGATCGG
CATTGCGTTCAGCCAGAACTACAGCGTGGAGCGCGATGTGCGCATGAAGGCCGGCGACAGCGTGGACATTCACAGCTACC
ACTTTGTGTTCCGCGACGTGCACGACATTCGCGGGCCGAACTACAGCGGCGGCGTCGGCATTATCGACGTCACGCGCAAC
GGCAAGCCGGAAGCCACGCTGCACGCGGAAAAACGCTACTACAGCGTGGCGCGCAGCATGATGACCGAAGCGGCTATCGA
CGGCGGTTTCAGCCGCGACTTGTATGCGGCGCTGGGGGAAGAACTGGACGACGGCTCCTGGGCGGTGCGGCTGTATTACA
AACCCTTCGTGCGCTGGATCTGGTTCGGCGGGGTATTTATGGCGATTGGCGGCATCTTGTGCATTCTCGATCCGCGCTAT
CGGATGAGCAAAAAACTCAAGCGTGAAGGTAAGCTGGAGGAGCAGGCATGA

Protein sequence :
MMPETGSFLLCLALAISLLLSIYPQWGAARQDSRMMAVARPLTYGMFAAIALAFICLVHAFVVNDFTVAYVAANSNSQLP
VYYRIAATWGAHEGSLLLWVLLLSCWSLAVALCSRSMPQDAVARVLSVMGMITAGFLLFIIMTSNPFTRTLPNFPIDGSD
LNPLLQDIGLIFHPPLLYMGYVGFSVAFAFAIASLMAGRLDTAWARWSRPWTTAAWVFLTLGIVLGSAWAYYELGWGGWW
FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAITAFSLCLLGTFLVRSGVLVSVHSFASDPARGMFILAYLV
IVIGGSLLLYAVKGGQVRSRVQHETFSRETFLLGNNVLLIAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA
PMALLMGIGPLVRWRRDEPTKLWRRLSVALAITLVLSILLPWLLQDSIAGMTVVGLIMAVWVIILTLMELHERATHRHGF
WRGLSHLSRSHWGMVLGHLGVAVTVIGIAFSQNYSVERDVRMKAGDSVDIHSYHFVFRDVHDIRGPNYSGGVGIIDVTRN
GKPEATLHAEKRYYSVARSMMTEAAIDGGFSRDLYAALGEELDDGSWAVRLYYKPFVRWIWFGGVFMAIGGILCILDPRY
RMSKKLKREGKLEEQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 0.0 73
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 2e-132 54