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Name : glcD (RSPO_c00834) Accession : YP_006028671.1 Strain : Ralstonia solanacearum Po82 Genome accession: NC_017574 Putative virulence/resistance : Unknown Product : glycolate oxidase (fad-linked subunit) protein Function : - COG functional category : - COG ID : - EC number : - Position : 872166 - 873659 bp Length : 1494 bp Strand : - Note : - DNA sequence : ATGAACGCGCCGCTGCCCGCCACCGCCCGCGATCCGTCCGCCGTCCAGGCCGAACTGATCGCCGCGCTGTCGCCCCTGGT GCCCGCCGATGCCCTGCTGTGGGAGCGCGAAGACACCACCCCTTACGAATGCGACGGCCTCGCCGCCTACCGGCAGGTGC CGCTGGCCGTGGTGCTGCCGGACAGCGAAGCGCAGGTGGTGGCGATCCTGCGCGCCTGCCACCGCCTGGGCGTGCCGGTG GTGCCGCGCGGCGCAGGCACCAGCCTGTCGGGCGGCGCGATGCCGACGCCGGGCGGGCTGGTGCTGTCGCTGGCCAAGTT CAAGCGCATCCTCAAGCTGGACGCCCACACCCGCACGGCGATCGTGCAGCCGGGTGTGCGCAACCTGGCCATCTCGGAAG CCGCCGCGCCGCACGGGCTGTATTACGCGCCCGATCCCTCGTCGCAGATCGCCTGCACCATCGGCGGCAACGTCAGCGAA AACTCCGGCGGCGTGCACTGCCTGAAGTACGGTCTGACCGTGCACAACGTGCTGCGCGTGCGCGCCGTGACGATGGACGG CGAAGTGGTCGAGTTCGGCAGCGAGGCGCCCGATGCGCCCGGCCTGGACCTGCTCGCCGCCGTGATCGGCTCCGAAGGCA TGCTGGCAGTGGTGACGGAAGTGACCGTGCGGCTGGTGCCCAAACCGCAGCTCGCGCAGGTCATCATGGCGAGCTTCGAC GATGTGGAAGCGGGCGGCAACGCGGTGGCGGAGGTGATCGCCGCCGGCATCATCCCGGCCGGGCTGGAGATGATGGACAA GCCCGCCACCGCCGCCGTCGAGGAGTTCGTCCGCGCCGGCTACGACCTCGATGCCGCCGCCATCCTGCTGTGCGAATCCG ACGGCACGCCCGAAGAGGTGGCCGAGGAGATCGCCCGCATGAGCGAGGTGCTGCGCGCCTGCGGCGCCACCCGCATCCAG GTGTCGCAGAGCGAGGCCGAGCGGCTGAAGTTCTGGAGCGGCCGCAAGAACGCCTTCCCGGCCGCCGGGCGCATCTCGCC GGACTATTACTGCATGGACGGCACCATCCCGCGCAAGCACATCGGCACGCTGCTCAAGCGCATCCAGCGGATGGAGCAGA AGTACGCGCTGCGCTGCATCAATGTCTTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCAACGGCGAGGAC CAGGACGAATGGCACCGCGCCGAGCTGTTCGGCGCGGACATCCTCGAGACCTGCGTGGAACTGGGCGGCACCGTCACCGG CGAACATGGCGTGGGAGTCGAGAAGCTCAACTCGATGTGCGTGCAGTTCTCGGCCGAGGAGCGCGATGCCTTCCTGCGCG TCAAGGCCGCCTTCGACCCGGCGCACCTGCTGAACCCCGACAAAGCCATCCCCACGCTCGCGCGCTGCGCCGAATACGGC AAGCTGCATGTGCGCAACGGCCTGCTGCCGCACCCCGACCTGCCGCGCTTCTGA Protein sequence : MNAPLPATARDPSAVQAELIAALSPLVPADALLWEREDTTPYECDGLAAYRQVPLAVVLPDSEAQVVAILRACHRLGVPV VPRGAGTSLSGGAMPTPGGLVLSLAKFKRILKLDAHTRTAIVQPGVRNLAISEAAAPHGLYYAPDPSSQIACTIGGNVSE NSGGVHCLKYGLTVHNVLRVRAVTMDGEVVEFGSEAPDAPGLDLLAAVIGSEGMLAVVTEVTVRLVPKPQLAQVIMASFD DVEAGGNAVAEVIAAGIIPAGLEMMDKPATAAVEEFVRAGYDLDAAAILLCESDGTPEEVAEEIARMSEVLRACGATRIQ VSQSEAERLKFWSGRKNAFPAAGRISPDYYCMDGTIPRKHIGTLLKRIQRMEQKYALRCINVFHAGDGNMHPLILFNGED QDEWHRAELFGADILETCVELGGTVTGEHGVGVEKLNSMCVQFSAEERDAFLRVKAAFDPAHLLNPDKAIPTLARCAEYG KLHVRNGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-137 | 60 |
