Gene Information

Name : cyaB (RSPO_m00306)
Accession : YP_006031483.1
Strain :
Genome accession: NC_017575
Putative virulence/resistance : Virulence
Product : type I (cyclolysin-type) secretion system ATP-binding component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 347063 - 349291 bp
Length : 2229 bp
Strand : -
Note : -

DNA sequence :
TTGAGCTGCGGCCATCGCTACACCGACGTTCCGCAAATCGCGGCGTTCCACCACATGACAAGCACCACCATCGACACCCC
AGCCACGCCAGGCCCCGAGCCCACGCGCGCGGATATCGACACCGCACTGGCCTGCCTCCTGATGATGGCCCGCCTGCACG
GCATCGCCGCGGAGGAAGCGCAGTTGCGCCACGAGTTCGGCCACCGCGCGTTCGACACGCAGACGGCGCTGCTGGCCGCC
AAGCATCTGGGCCTGTCGGCCAAGGCGGTGCGCCAGCCGGTTGAGCGGCTGGACCGGGCGCCGCTGCCGGCCATCGCCAT
CGATCAGTCCGGCCAGCACTTCATCCTGGCCAAATACGACGCGACCAACGCCGACGAGCCCAAGCTGCTGATCCAGCGGC
CCGGCCATCCGCCGAGCGTGCTGACATTGCAGGACTTTCTCGCGGCGTGGTCCGGCGAGCTGATCCTGTGCACCAGCAAG
GCGACCTTCGCCGGCGACATGGCGAAGTTCGACTTCACCTGGTTCATCCCCGCCGTCGTCAAGTACCGCAAGCTGCTGGG
CGAAGTCCTGCTGGTGTCGCTCACGCTGCAGATCATCGGGCTGGTGACGCCGATGTTCTTCCAGGTGGTGATGGACAAGG
TGCTGGTCAATCACGCCATGAAGACGCTGAACGTGATCGCCGTCGGCCTGATCTGCGCGATCCTGTTCGAGGTCACGCTC
ACGAGCATCCGCACCTGGGTGTTCGCGCATACCAGCAGCAAGATCGACGTGGAGCTCGGTGCGCGGCTGTTCCGGCATCT
GCTGAGCCTGCCGCTGGCGTACTTCCAGTCCCGGCGCGTGGGCGATTCGGTGGCGCGGGTGCGCGAGCTGGAGAACATCC
GCAGCTTCCTGACCGGCAATGCCATGACGGTGGTGCTGGACCTGATGTTCTCGTTCGTGTTCCTGGCGGTGATGCTGTGG
TACAGCGTGTGGCTGACGCTGATCGTGGTGGTGTCGATTCCGCTGTATATCGGGCTGTCGGCCCTGTTCACGCCCGTCAT
CCGCGCGCGGCTGGACGTCAAGTTCAACCGCAACGCCGAGAACCAGTCGTTCCTGGTGGAAACCATCAGCGGCATCGACA
CCGTCAAGGCGATGGCCGTGGAGCCGCGCTGGACGCACAAGTGGGATCAGCAGCTCGCCGCCTACGTCACCGCCGGGCTG
GCGGTCACCAACGTGGCGACCATCGCCAGCGGCGGGGTCACGCTGGTCAGCAAGCTGGTGACGGCGGCCATCATGTGGCT
CGGGGCGACGCTGGTGATCGACCACAAGATGACCGTGGGTGAGTTGGTGGCCTTCAACATGCTGGCCGGCCAGGTGTCGT
CGCCCATCCTGCGGCTGGCCCAGTTGTGGAACGACTTCCAGCAGGTGGGGATTTCGATGAGCCGGCTGGGGGACATCCTG
AACGCGCGCACCGAGGTCGCCGGCCAGAAGTCGCGCCTGCCGAAGCTGGCCGGCGCGATCGGGTTCGACCAGGTGGCCTT
CCGCTATCGGCCCGATGCGCCCGATGTCATCCGCGGGATTTCGCTCGCGATCGCGCCGGGCGAGGTGATCGGCATCGTCG
GCCGCTCGGGATCGGGCAAGAGCACGCTGACCAAGCTGGTGCAGCGCCTGTATGTGCCGGAGCGCGGGCGCGTGCTGATC
GACGGGCAGGACATCGCCATCGTCGATACGACTTCGCTGCGGCAGCAGATCGGGGTGGTGCTGCAGGAGAACACGCTGTT
CAACCGCTCCATCCGCGACAACATCGCCTTGACGAATCCGGCGGCGCCGCTGGAAGCCATCATCGAGGCCGCCAGGCTGG
CCGGCGCGCACGAGTTCATCTGCGAGCTGCCGGAAGGCTACGACACGATCGTCGGCGAGCACGGCACGGGGCTGTCGGGC
GGACAGCGCCAGCGCATCGCCATTGCGCGCGCGCTGCTGACGAATCCGCGCATCCTCATCTTCGATGAGGCGACCAGCGC
GCTGGACTACGAGTCGGAGAAGATCATCCAGGACAACATGCGGCGCATCTGCCAGGGGCGCACCGTGCTGATCATTGCGC
ACCGGCTGTCGGCGGTGCGCGAGGCCAACCGCATCATTGTCATGGAACGGGGGCAGATCGCGGAAATAGGCAGCCACGAC
CAGTTGCTGAAGAACCCGCAGGGCATCTACGCGCATCTGTATGCCCTCCAGCAGGGAGGTGCGGCATGA

Protein sequence :
MSCGHRYTDVPQIAAFHHMTSTTIDTPATPGPEPTRADIDTALACLLMMARLHGIAAEEAQLRHEFGHRAFDTQTALLAA
KHLGLSAKAVRQPVERLDRAPLPAIAIDQSGQHFILAKYDATNADEPKLLIQRPGHPPSVLTLQDFLAAWSGELILCTSK
ATFAGDMAKFDFTWFIPAVVKYRKLLGEVLLVSLTLQIIGLVTPMFFQVVMDKVLVNHAMKTLNVIAVGLICAILFEVTL
TSIRTWVFAHTSSKIDVELGARLFRHLLSLPLAYFQSRRVGDSVARVRELENIRSFLTGNAMTVVLDLMFSFVFLAVMLW
YSVWLTLIVVVSIPLYIGLSALFTPVIRARLDVKFNRNAENQSFLVETISGIDTVKAMAVEPRWTHKWDQQLAAYVTAGL
AVTNVATIASGGVTLVSKLVTAAIMWLGATLVIDHKMTVGELVAFNMLAGQVSSPILRLAQLWNDFQQVGISMSRLGDIL
NARTEVAGQKSRLPKLAGAIGFDQVAFRYRPDAPDVIRGISLAIAPGEVIGIVGRSGSGKSTLTKLVQRLYVPERGRVLI
DGQDIAIVDTTSLRQQIGVVLQENTLFNRSIRDNIALTNPAAPLEAIIEAARLAGAHEFICELPEGYDTIVGEHGTGLSG
GQRQRIAIARALLTNPRILIFDEATSALDYESEKIIQDNMRRICQGRTVLIIAHRLSAVREANRIIVMERGQIAEIGSHD
QLLKNPQGIYAHLYALQQGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 56
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 56
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cyaB YP_006031483.1 type I (cyclolysin-type) secretion system ATP-binding component VFG1269 Protein 0.0 67
cyaB YP_006031483.1 type I (cyclolysin-type) secretion system ATP-binding component VFG1557 Protein 0.0 56
cyaB YP_006031483.1 type I (cyclolysin-type) secretion system ATP-binding component VFG1501 Protein 0.0 56
cyaB YP_006031483.1 type I (cyclolysin-type) secretion system ATP-binding component VFG0907 Protein 0.0 56
cyaB YP_006031483.1 type I (cyclolysin-type) secretion system ATP-binding component VFG0841 Protein 2e-179 55