Gene Information

Name : Sbal117_0149 (Sbal117_0149)
Accession : YP_006035446.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 171678 - 172184 bp
Length : 507 bp
Strand : -
Note : KEGG: ppg:PputGB1_0695 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGACGTCGGTCAATATTTCTTCTCCTATCAATAACCTATATAGAGATAACCAGTTTTGGCTACGCGGCTGGCTATACTC
ACGCGTGGGTTGTTCAGAAACAGCGGCCGACCTAGCCCAAGATACATTTCTACGTTTGTTAAAAACCGGAAATTTACCGC
CCTCAGGCGAATCGCGGCGTTTTTTAACTCGCATTGCCAAAGGATTGATGATTGATGCTTATCGTCGGCAGAAGATTGAA
GAAGCCTACCTAGAAAGTTTGAGCTTGATGCCAGAAACCTTCATTCCTGGGCCAGAGATCCATCATGTCATCATTGAAAC
ACTCGCTGAAATTGCCGTTATGCTCGATAACTTGCCGGATAATGTGCGCTTGACGCTGTTACTGCGCCAGATAGAGGGTT
TAAGCTATGCCGATATTGCTAAGCAACTATCAGTTTCTGTTTCATCGGTAGAAAAGTATGTTGCGCGAGGCTTAGCGGCC
TGCTGCCTCGCGCTGGAATCCTATTAG

Protein sequence : 
MTSVNISSPINNLYRDNQFWLRGWLYSRVGCSETAADLAQDTFLRLLKTGNLPPSGESRRFLTRIAKGLMIDAYRRQKIE
EAYLESLSLMPETFIPGPEIHHVIIETLAEIAVMLDNLPDNVRLTLLLRQIEGLSYADIAKQLSVSVSSVEKYVARGLAA
CCLALESY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 5e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sbal117_0149 YP_006035446.1 ECF subfamily RNA polymerase sigma-24 subunit VFG1049 Protein 2e-31 42