Gene Information

Name : Sbal117_2534 (Sbal117_2534)
Accession : YP_006037736.1
Strain : Shewanella baltica OS117
Genome accession: NC_017579
Putative virulence/resistance : Unknown
Product : RNA methyltransferase, TrmH family, group 1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2887057 - 2887785 bp
Length : 729 bp
Strand : -
Note : KEGG: shw:Sputw3181_1859 RNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU

DNA sequence :
ATGCTAAGTAATATTCGAGTGGTTTTAGTGGGGACTTCGCACCCCGGCAATATTGGTTCCACTGCCAGAGCGATGAAGAC
TATGGGTCTGTCAAATCTGTACCTTGCAGAACCGCGTGTTGAACCCGATGGGCATTCCATTGCATTAGCCGCGGGTGCAT
CGGATATTCTGAAACATCTTGTGAAAGTGGATTCACTCGCTGAAGCGATTGCCGATTGCTGCCTCGTTATTGCAACCAGC
GCGCGCAGTCGCACCTTAGATTGGCCGATGTTAGAGCCAAGAGAAGCTGGGGTGAGATTAGCGACCGAGGCACTTAATGG
TCCCGTTGCAATCGTGTTTGGCCGTGAGAACCACGGGTTGAGCAATGAAGAGTTGCAACAGTGCACTTATCATGTGGCGA
TTCCTGCAAATCCTGAATACAGCTCGCTCAATCTTGCGCAAGCCGTACAAATCATTTGTTATGAAACCCGTATTGCCCAC
CTCGCGCAAAAAGAAGTGGCCGAAGAAGAGCTGACGGAGTATCCCTTGGCTGCCGATCAGGAACGTTTCTTTGCACACCT
TGAGACGACACTGCTATCAACCGGCTTTATCATTAAGAATCATCCCGGACAAGTGATGATGAAACTGCGCCGCTTGTTTA
GCCGCGCACGGATTGAGAGTCAGGAGATGAATATTCTCAGGGGTATTTTGACCTCTATTGAGAAAGTGACGGGTTCTAAA
GACAAATAG

Protein sequence :
MLSNIRVVLVGTSHPGNIGSTARAMKTMGLSNLYLAEPRVEPDGHSIALAAGASDILKHLVKVDSLAEAIADCCLVIATS
ARSRTLDWPMLEPREAGVRLATEALNGPVAIVFGRENHGLSNEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRIAH
LAQKEVAEEELTEYPLAADQERFFAHLETTLLSTGFIIKNHPGQVMMKLRRLFSRARIESQEMNILRGILTSIEKVTGSK
DK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 2e-59 51