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Name : Sbal117_4333 (Sbal117_4333) Accession : YP_006039480.1 Strain : Shewanella baltica OS117 Genome accession: NC_017579 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : - COG ID : - EC number : - Position : 4986811 - 4990842 bp Length : 4032 bp Strand : - Note : TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; HAMAP: DNA-directed RNA polymerase subunit beta; KEGG: shw:Sputw3181_0149 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase DNA sequence : ATGGTTTACTCCTATTCTGAAAAGAAGCGTATTCGCAAAGACTTTGGTAAGCGTCCAAAAGTTTTGGATATCCCTTATTT ATTGTCTATCCAGCTAGACTCTTTTAAGAAGTTCACCGATCAAGATCCTACCGGTGAGCGCGGTTTAGAAGCCGCCTTCC GTAGCGTTTTTCCCATCAAGAGCTTTTCTGGTAATTCAGAACTGCAATACGTCAGCTATAAGCTTGGCGAGCCTGTTTTT GATGTGAAAGAGTGTCAGATCCGTGGTGTTACGTACTCAGCTCCACTACGCGTTAAATTACGCATGGTGTTGTATGACCG TGAAGCAGCGGCAGGCACAGTAAAAGATATTAAAGAACAAGAAGTCTACATGGGTGATATCCCATTGATGACGGATAACG GTACTTTTGTTATCAACGGTACTGAGCGTGTAATCGTATCTCAATTACATCGTTCTCCAGGCGTGTTCTTCGATCATGAC CGTGGTAAAACCCACTCATCAGGTAAGGTGCTGTATAACGCACGTATTATTCCTTACCGTGGTTCATGGCTTGACTTTGA ATTCGATCCTAAAGATGCACTATTTGTGCGTATTGACCGTCGCCGCAAACTGCCTGCGACCATCATGTTACGTGCATTAG AATATTCTACTCAAGAGATTCTCGATCTGTTCTTTGAACGCGTTGAGTTCAAGATCAAGAAAGATACTCTGGTTATGGCT TTGGTTCCTGAGCGTCTACGTGGCGAAACTGCCAGCTATGACATCAAGGATGCTGAAGGTTCTGTATTGGTTGAAGCCGG TCGTCGTATCACTGCGCGCCACATTCGCCAATTAGAAAAAACCAATACCACTGAGCTCGAAGTGCCAGTTGAATATATCG TGGGCAAATATGCTGCTCAAGATTATATCGATCCGGACACGGGTGAAGTTTTAGTCTCTGCCAACAGTGAAATTAGCCTA GAAGATCTGGCTAAATTATCATTGGCCGGTATTAAAGAACTCAGCACGTTGTATATCAACGAGCTAGATCATGGTGCTTA TATTTCAGATACGCTGCGTATCGATTCAACCACTAACCGCTTAGAAGCGCTGGTTGAGATCTATCGTATGATGCGTCCTG GCGAGCCACCAACCAAAGATGCTGCCGAAGCACTATTCCAGAACTTGTTCTTCAGTGAAGAGCGTTATGACCTGTCTAAA GTAGGTCGTATGAAGTTCAACCGTCGTCTCAGCATTCCTGATGACGAAGGTAGCGGTGTATTGTCTAAAGAAGACATCGT CGCGGTAATGAAGAACATCATTCATATCCGTAACGGTTTCGACGAAGTCGATGATATCGATCACTTAGGCAACCGCCGTA TTCGTAGCGTCGGTGAAATGGCTGAAAACCAATTCCGCGTAGGTTTAGTCCGTGTTGAGCGCGCCGTGCGTGAACGTCTA TCTTTAGGCGATCTGAACGAGCTGATGCCACAAGACTTGATCAACGCTAAGCCAATTTCGGCTGCAGTGAAAGAGTTCTT CGGTTCTTCTCAGCTGTCACAATTCATGGACCAAAACAACCCGCTGTCAGAAGTAACGCATAAGCGTCGTATTTCTGCTC TTGGCCCCGGTGGTTTGACTCGTGAACGTGCAGGCTTCGAAGTCCGCGACGTACATCCAACGCATTATGGTCGTTTATGT CCAATTGAGACCCCTGAAGGTCCAAACATTGGTCTAATCAACTCATTAGCAAGTTTTGCCCGTACTAACTCATACGGCTT CCTTGAAACGCCATACCGCAAGGTTATCGACGGCGTGATTACTGACGAAGTGGAATACTTGTCAGCAATCGAAGAAGGTC GTTATGTGATTGCACAGGCGAACATTGAAATTGATGCGAACGGTCGTATGGCAGAAGAGCAAATTGCTTGTCGTCATAAA GGTGAATCTACCTTTATGCGCGCTGCTGACATCCAGTATATGGACGTTTCGCCACAACAGATTATTTCTGTTGCTGCGTC ACTGATCCCGTTCCTAGAACACGATGATGCTAACCGTGCATTGATGGGTGCGAACATGCAACGTCAAGCCGTACCAACAC TGCGCTCTGAAAAGCCGTTAGTAGGTACTGGTATTGAACGCACGCTGGCCGTTGACTCAGGTGTTGTGGTTGTTGCTAAG CGTGGTGGTTTTGTAGACTACGTTGATGCGAGCCGTATCGTTGTTAAGGTAAATGAAGATGAGCTACGCCCAGGCGAAGC CGGTATCGACATTTATAACCTGACTAAGTACACCCGTTCTAACCAAAACACTTGTATCAACCAACGTCCTTGTTGTTCAG TTGGTGAGCCAGTCGTTCGTGGTGACGTGTTAGCAGACGGTCCGTCTACTGACTTAGGTGACTTAGCCCTTGGCCAGAAC ATGCGTATCGCATTCATGCCTTGGAACGGTTACAACTTCGAAGATTCGATCTTAATTTCTGAGCGCGTAGCGCAAGAAGA CCGCTTCACTACTATCCACATTCAGGAGCTGTCTTGTATTGCTCGTGATACTAAGTTGGGTAGCGAAGAAATCACGGCTG ATATTCCAAACGTAGGTGAGTCTGCTCTGTCTAAACTCGACGAGTCAGGTATCGTTTACATTGGTGCAGAAGTGAAGGGC GGCGATATTCTGGTTGGTAAAGTGACGCCAAAAGGCGAAACACAGCTAACGCCAGAAGAGAAGTTATTGCGAGCTATCTT CGGTGAGAAAGCGTCTGACGTTAAAGACAGTTCACTGCGTGTACCTAACTCTGTTAAGGGTACTATCATCGACGTTCAGG TATTTACCCGTGACGGCGTTGAGAAAGACAAGCGTGCAGTTGAAATCGAAGAGATGCACATTGCCCAAGCTCGTAAAGAC TTAGGTGAAGAGTTCAAGATCCTTGAAGAAGGTGTATTGAGCCGTGCGCGTAACTTGTTAATCGGTGCTGGTTTCACTGA CGCGCAAATTGCTGCCTTGCCACGTAAAGATGTTTTGATTCAAGTCATTGACGATGAAACTAAACAAACTGAACTTGAGC AATTAGCTGAACAGCATGAAGAGCTGAAAGCTGACTTCGATAAGAAGTTTGAAATCAAACGTCGTAAGATCACCCAAGGT GATGACTTGGCTCCAGGCGTACTCAAGATCGTTAAGGTTTACTTAGCGGTTAAGCGTACTATCCAACCTGGTGACAAGAT GGCGGGTCGTCACGGTAACAAGGGTGTTATCTCTAAGATTTGCCCAATCGAAGACATGCCGTATGACGAACAAGGTAACC CAGTAGACATCGTATTGAACCCACTAGGTGTTCCATCACGTATGAACATTGGTCAGGTACTTGAAGTCCATATGGGCGCT GCTGCCAAAGGCATTGGTAACAAGATCACTGCGATGCTTGAAGAACAGCGTGAGCTGGCTGAAGTTCGTGGCTACATCAA ACAAGTTTATGAATTAGGTGACGAAGTGCAACAGCGCGTCGATATCGATTCATTCACTGATGATGAAGTATTACGTCTTG CGACTAACCTGAAAGGCGGTATCCCGATTGCAACTCCTGCATTCGACGGCGCTAAAGAGAAAGAGATCAAGCAGATGCTT GAACTTGCAGGTTTGCCAACCTCTGGTCAGTTGAAGTTGTTTGATGGTCGTACCGGTAACGAATTTGAGCGTCAAGTAAC TGTTGGTTACATGTACATGCTCAAACTGAACCACTTAGTTGATGACAAGATGCACGCCCGTTCTACCGGTTCGTACAGCT TAGTGACTCAACAACCACTGGGCGGTAAAGCTCAGTTCGGTGGTCAGCGTTTCGGTGAGATGGAGGTGTGGGCACTAGAA GCATACGGTGCCGCTTATACGCTTCAAGAAATGCTCACTGTTAAATCGGATGACGTTAACGGTCGTACTCAGATGTATAA GAACATCGTCGACGGTAACCATCAGATGCAACCTGGCATGCCAGAGTCCTTCAACGTGTTACTGAAGGAGATCCGTTCAC TCGGTATTAATATCGAGTTGGATCAGGCATAA Protein sequence : MVYSYSEKKRIRKDFGKRPKVLDIPYLLSIQLDSFKKFTDQDPTGERGLEAAFRSVFPIKSFSGNSELQYVSYKLGEPVF DVKECQIRGVTYSAPLRVKLRMVLYDREAAAGTVKDIKEQEVYMGDIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHD RGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDALFVRIDRRRKLPATIMLRALEYSTQEILDLFFERVEFKIKKDTLVMA LVPERLRGETASYDIKDAEGSVLVEAGRRITARHIRQLEKTNTTELEVPVEYIVGKYAAQDYIDPDTGEVLVSANSEISL EDLAKLSLAGIKELSTLYINELDHGAYISDTLRIDSTTNRLEALVEIYRMMRPGEPPTKDAAEALFQNLFFSEERYDLSK VGRMKFNRRLSIPDDEGSGVLSKEDIVAVMKNIIHIRNGFDEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVRERL SLGDLNELMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLC PIETPEGPNIGLINSLASFARTNSYGFLETPYRKVIDGVITDEVEYLSAIEEGRYVIAQANIEIDANGRMAEEQIACRHK GESTFMRAADIQYMDVSPQQIISVAASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERTLAVDSGVVVVAK RGGFVDYVDASRIVVKVNEDELRPGEAGIDIYNLTKYTRSNQNTCINQRPCCSVGEPVVRGDVLADGPSTDLGDLALGQN MRIAFMPWNGYNFEDSILISERVAQEDRFTTIHIQELSCIARDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVKG GDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNSVKGTIIDVQVFTRDGVEKDKRAVEIEEMHIAQARKD LGEEFKILEEGVLSRARNLLIGAGFTDAQIAALPRKDVLIQVIDDETKQTELEQLAEQHEELKADFDKKFEIKRRKITQG DDLAPGVLKIVKVYLAVKRTIQPGDKMAGRHGNKGVISKICPIEDMPYDEQGNPVDIVLNPLGVPSRMNIGQVLEVHMGA AAKGIGNKITAMLEEQRELAEVRGYIKQVYELGDEVQQRVDIDSFTDDEVLRLATNLKGGIPIATPAFDGAKEKEIKQML ELAGLPTSGQLKLFDGRTGNEFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALE AYGAAYTLQEMLTVKSDDVNGRTQMYKNIVDGNHQMQPGMPESFNVLLKEIRSLGINIELDQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 68 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 81 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 81 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 81 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 80 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 80 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 80 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 71 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 70 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 68 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 65 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 64 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 63 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | AM180355.1.gene120.p | Protein | 0.0 | 48 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | CP001581.1.gene3846. | Protein | 0.0 | 47 |
| Sbal117_4333 | YP_006039480.1 | DNA-directed RNA polymerase subunit beta | NC_012469.1.7686402. | Protein | 5e-179 | 45 |
