Gene Information

Name : F11_00195 (F11_00195)
Accession : YP_006046307.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : cytochrome c-type biogenesis protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 41257 - 41976 bp
Length : 720 bp
Strand : -
Note : COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component

DNA sequence :
ATGCAAAAATTCGCCAATCCCACCCGCTTCCTGAAACTGAGCAAGGTTCTGGTGCCGTGGTGCGCCGGCCTGACGGCGGT
GCTGTCGGTGGTCGGGCTGGTCTGGGGGCTGGCCTTCGCCCCGCCCGATTATCAGCAGGGCGAGACGGTGCGGATCATGT
ATGTTCACGTGCCCTCGGCCTGGATGGGCATGTTCGCCTATATGTTCATGGCCGCCGCCTCGGCGGTGGCGCTGATCTGG
AAGCATCCGCTGGCCGATCTCGCCGCCCGCGCCGCCGCGCCGATCGGCGCTGCCTTCACCCTGATCTGTCTGGTGTCGGG
ATCGCTGTGGGGCAAGCCTATGTGGGGCGCCTGGTGGGTCTGGGATGCCCGGCTGACCTCGATGCTGGTGCTGTTCTTTC
TGTATCTCGGCTATATGGCGCTGGCCAACGCCTTCGACGATGTGACGCGCGGCAATCGGGCGGCGGCCATCTTGTGCCTG
ATCGGCGCGGTGAACGTGCCGATCATCAAATTCTCGGTGGATTGGTGGAACACCCTGCACCAGCCGGCCAGCGTGGTGAA
AATGGGCGGTCCGGCCATTGATCCCAGCATCTTGTGGCCGCTTTTGCTGATGGGCGTCGCCTTCCAGCTTTATTTCGCCA
CCGTTGTCCTGCTTCGTATGGAAAGCGGCATCGCCGCCGCCAAGGTGCGGGCACTGGGACTGCTGGAGGCCGGCGGCTGA

Protein sequence :
MQKFANPTRFLKLSKVLVPWCAGLTAVLSVVGLVWGLAFAPPDYQQGETVRIMYVHVPSAWMGMFAYMFMAAASAVALIW
KHPLADLAARAAAPIGAAFTLICLVSGSLWGKPMWGAWWVWDARLTSMLVLFFLYLGYMALANAFDDVTRGNRAAAILCL
IGAVNVPIIKFSVDWWNTLHQPASVVKMGGPAIDPSILWPLLLMGVAFQLYFATVVLLRMESGIAAAKVRALGLLEAGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 3e-33 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_00195 YP_006046307.1 cytochrome c-type biogenesis protein CcmC VFG1856 Protein 8e-30 46