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Name : F11_03860 (F11_03860) Accession : YP_006047039.1 Strain : Rhodospirillum rubrum F11 Genome accession: NC_017584 Putative virulence/resistance : Virulence Product : chaperone clpB Function : - COG functional category : - COG ID : - EC number : - Position : 882809 - 885421 bp Length : 2613 bp Strand : + Note : COG0542 ATPases with chaperone activity, ATP-binding subunit DNA sequence : ATGGATCCCGAAAAACTGACGGATCGGTCGAAGGGCTTTCTGCAGGCGGCTCAGACCATCGCCCTGCGCGAAACCCACCA GCAGGTGACGCCCGAGCATCTGCTCAAGGCCCTGCTTGATGATAAAGAAGGATTGGCGGCCAATTTGATTCGCGCCGCTG GCGGTGACCCGCTGCGCGCCCAGGAGGCGGTCAACCGCGAAGTCGACAAACTGCCCAAGGTGCAAGGCGCCCAGCAGATG TATTGGGCCCAGTCGCTGGCCCGGGTGATCGATCAGGCGACGCGCATGGCCGAAAAGGCCGGCGATAGCTTCGTGACCGT GGAGCGCTTGCTGATCGCCCTGGCGATGGCCGCCGAGACCCCGGCCAAGCGCATCCTCGCCGAGGCCGGCGCCACGCCCC AGGGCCTCAACAAGGCGGTCGAAGACCTGCGCAAGGGCCGCAAGGCCGATAGCGCCGGGGCGGAATCCCAATATGACGCC CTGAAGAAATACGCCCGCGACCTGACCGAGGCGGCGCGCGAGGGCAAGCTTGACCCGGTGATCGGCCGCGACGAGGAAAT CCGCCGCACCATCCAGGTGCTCAGCCGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCCGGTGTCGGCAAGACGG CGATCATCGAGGGTCTGGCCCTGCGCATCGTCAATGGCGACGTTCCCGAAAGCCTGCAGAACAAGAAGCTGATGGCCCTT GACCTTGGCGCCATGGTCGCCGGCGCCAAGTTCCGTGGCGAGTTCGAGGAACGCCTGAAGGCGATGCTGACCGAGGTGTC GGCGGCCGAGGGCGAGATCATCTTGTTCATCGACGAGATGCACACCCTGATCGGCGCCGGGGCCGGGGAGGGGGCGATGG ACGCCTCGAACCTGCTCAAGCCGGCCTTGGCGCGCGGCGATCTGCATTGCGTTGGCGCGACCACGCTCAATGAATACCGC AAGCATGTGGAAAAGGACGCGGCCCTGGCCCGGCGTTTCCAGCCGGTTTTCGTCTCCGAGCCGGGTGTGGCCGATACCAT TTCGATCCTGCGCGGCATCAAGGAGAAGTACGAGCTGCACCACGGGGTGCGCATCGCCGATAACGCCCTGGTCGCCGCCG CCACCTTGTCCAACCGCTATATCACCGACCGCTTCCTGCCCGATAAGGCCATCGACCTGATGGACGAGGCGGCAAGCCGC CTGCGCATGGAGGTCGACAGCAAGCCCGAGGCCCTGGACGAGCTTGATCGCCGCATCATCCAGCTGAAAATCGAGCGCGA GGCCCTGCGCAAGGAAAAGGACATCGCCTCGGAGGCCCGTCTTAGCGATCTGGAAAAGGAACTGGCCGATCTGGAAAGCC AGTCGGCGACCCTGACCGAGGACTGGAAGCGCGAAAAGGAAGGTCTGGCCGGATCGACGCGCATCAAGGAGCAATTGGAG CAGGCGCGCGGTGATCTTGATATCGCCAAACGCCAAGCCAATTGGGCGCGGGCGGGCGAGTTGGAATATGGCGTCATCCC CGATCTCGAACGCCGTTTGGGCGAGGTCGAATCCGGTGATGGCCTCGCCCATCGCCAGGGTGGCAAGCTGGTCAACGAGG TGGTGACCGCCGAGACCATCGCTTCGGTGGTGTCGCGCTGGACCGGCATTCCCGTTGACAAGATGCTGGCGGGCGAACGC GAAAAGCTGCTGGGCATGGAAAAGGTTCTGGCTTCAAGGGTGGTCGGCCAGCGCGAGGCGGTGGTGGCCGTTTCCAACGC CGTCCGCCGCTCGCGGGCCGGCTTGCAAGATCCCAACCGGCCGATGGGGTCGTTCCTGTTCCTCGGCCCCACCGGCGTGG GCAAGACCGAACTGACCAAGGCCCTGGCCGCCTTCCTGTTCGACGACGAGCAGGCGATGGTGCGCATCGACATGTCCGAA TACATGGAAAAGCACGCGGTTTCCCGGCTGATCGGCGCGCCTCCGGGCTATGTCGGCTATGACGAGGGCGGGGCTTTGAC CGAGGCGGTGCGGCGCCGGCCCTATCAGGTGATCTTGTTTGACGAGGTCGAGAAGGCCCATCCCGATGTGTTCAACGTGC TTCTGCAGGTGCTTGACGACGGCCGCTTGACCGATGGCCAGGGCCGCACCGTCGATTTCCGCAATACCCTGATCGTGCTG ACCTCGAACCTGGGGGCCGATATCCTGGCCAACCAGCCCGAGGGCGATGATTCAGGCGCGGTGCGCGGCGCGGTGATGGA GATGGTGCGCGCCGCCTTCCGCCCCGAGTTCCTGAACCGCCTTGACGAGATCTTGCTGTTCCATCGCCTGTTCCGCGAGA ACATGGCCGGGATCGTGTCGATCCAGCTTGGCCGTTTGGCCGACCGGCTGCGCGATCGCAAGATGACCCTTGATCTGGAC GACGCGGCGCGCGACTGGCTGGCCGAGCGCGGCTATGACCCGGTCTATGGCGCCCGGCCGCTTAAGCGGGTGATCCAGCG CTCTTTGGAAAATCCGCTGGCCACCCTGGTGCTTGATGGCCGGATCAAGGATGGCGATGTCATCCGCATTACCGTTGAAG GAGGCAAACTGGTGGTCAATGGCGAAGCGTTGTCTTTGGACACCGCCGCATGA Protein sequence : MDPEKLTDRSKGFLQAAQTIALRETHQQVTPEHLLKALLDDKEGLAANLIRAAGGDPLRAQEAVNREVDKLPKVQGAQQM YWAQSLARVIDQATRMAEKAGDSFVTVERLLIALAMAAETPAKRILAEAGATPQGLNKAVEDLRKGRKADSAGAESQYDA LKKYARDLTEAAREGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIIEGLALRIVNGDVPESLQNKKLMAL DLGAMVAGAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIGAGAGEGAMDASNLLKPALARGDLHCVGATTLNEYR KHVEKDAALARRFQPVFVSEPGVADTISILRGIKEKYELHHGVRIADNALVAAATLSNRYITDRFLPDKAIDLMDEAASR LRMEVDSKPEALDELDRRIIQLKIEREALRKEKDIASEARLSDLEKELADLESQSATLTEDWKREKEGLAGSTRIKEQLE QARGDLDIAKRQANWARAGELEYGVIPDLERRLGEVESGDGLAHRQGGKLVNEVVTAETIASVVSRWTGIPVDKMLAGER EKLLGMEKVLASRVVGQREAVVAVSNAVRRSRAGLQDPNRPMGSFLFLGPTGVGKTELTKALAAFLFDDEQAMVRIDMSE YMEKHAVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVL TSNLGADILANQPEGDDSGAVRGAVMEMVRAAFRPEFLNRLDEILLFHRLFRENMAGIVSIQLGRLADRLRDRKMTLDLD DAARDWLAERGYDPVYGARPLKRVIQRSLENPLATLVLDGRIKDGDVIRITVEGGKLVVNGEALSLDTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-109 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-109 | 43 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 6e-105 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| F11_03860 | YP_006047039.1 | chaperone clpB | VFG0079 | Protein | 9e-176 | 48 |
| F11_03860 | YP_006047039.1 | chaperone clpB | VFG2076 | Protein | 7e-119 | 45 |
| F11_03860 | YP_006047039.1 | chaperone clpB | VFG2084 | Protein | 1e-109 | 43 |
