Gene Information

Name : F11_04670 (F11_04670)
Accession : YP_006047201.1
Strain : Rhodospirillum rubrum F11
Genome accession: NC_017584
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1082129 - 1082425 bp
Length : 297 bp
Strand : +
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGCAACAAGAAGCCTTGGGCATGGTGGAAACCAAAGGACTGGTCGGTGCGATCGAAGCGGCCGACGCCATGGTGAAATC
GGCGAACGTGGTCCTGATGGGCTACGAGAAGATCGGCTCGGGTCTGGTGACCGTGATGGTTCGCGGTGACGTGGGCGCGG
TGAAGGCGGCGACGGATGCCGGCGCCGTGGCGGCCTCGAAGATCGGTGAAGTCGTGTCCGTCCACGTCATCCCGCGGCCC
CACACCGAAGTGGAAAAGATCCTGCCGCGCGGCCTCTCCGCTTCGGCGGCCCAATAA

Protein sequence : 
MQQEALGMVETKGLVGAIEAADAMVKSANVVLMGYEKIGSGLVTVMVRGDVGAVKAATDAGAVAASKIGEVVSVHVIPRP
HTEVEKILPRGLSASAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 7e-18 69
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-16 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-17 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F11_04670 YP_006047201.1 microcompartments protein VFG1596 Protein 3e-18 69
F11_04670 YP_006047201.1 microcompartments protein VFG1598 Protein 9e-17 66
F11_04670 YP_006047201.1 microcompartments protein VFG1597 Protein 2e-17 65