Gene Information

Name : SSGZ1_0509 (SSGZ1_0509)
Accession : YP_006073916.1
Strain : Streptococcus suis GZ1
Genome accession: NC_017617
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase, class-2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 550297 - 551799 bp
Length : 1503 bp
Strand : -
Note : -

DNA sequence :
ATGTCAACTGAACATTTTGAAGAATTAAATGACCAACAGATTGTCCGTCGTGAGAAAATGACGGCTCTTGCTGAACAAGG
CATTGACCCATTTGGAAAACGTTTTGAGCGTTCTGCCAACTCAGCTGAATTGAAGGCCCAGTACGAAGACAAATCAAAAG
AAGACTTGGAAGAATTAGGGCAAACAGCAATCATTGCAGGTCGTATTATGACCAAGCGTGGTAAGGGTAAGGCAGGTTTT
GCTCACATTCAAGACCGCGAAGGCCAGATTCAGATCTACGTTCGTAAGGATGATGTTAGCGAAGAAAACTATGAAATCTT
CAAAAAAGCAGACCTAGGTGACTTTATCGGTGTCGAGGGAGATGTCTTCAAGACAAACGTTGGTGAGTTGTCTATCCATG
CTCGCAAGTTGACTCACTTGTCTAAAGCGCTCCGCCCATTGCCAGAAAAATTCCACGGTTTGACAGACATCGAGACCCGC
TACCGCAAACGTTATTTGGACTTGATTACTAACCGCGAGAGCTTTGATCGCTTTGTGACCCGCTCAAAAATTATCTCAGA
AATCCGCCGTTACCTTGACGGACTTGGTTTCTTGGAAGTGGAAACACCAGTTCTTCACAACGAAGCTGGTGGTGCTGCAG
CTCGTCCATTCATCACCCACCACAATGCCCAAAACATTGACATGGTCCTTCGTATCGCGACAGAACTCCACCTCAAACGC
CTGATTGTCGGCGGTATGGAACGCGTTTATGAAATCGGCCGCATCTTCCGTAACGAAGGTATGGATGCGACCCACAACCC
TGAGTTCACTTCCATTGAGGTTTACCAAGCTTATGCAGACTACCAAGACATCATGGACTTGACCGAAGGTATTATCCAGC
ACACTGCCAAGGCTGTTGTCGGTGATGGTCCGGTGACTTATCAGGGCACTGAAATTGCTATCCACGAGCCATTCAAGCGT
ATCCACATGGTTGACGCTATTAAGGAACAAACTGGCGTGGACTTCTGGCAAGAGATGAGCTTCGAGGAAGCAAAAGCCCT
TGCAGCTGAGCACAAGGTCCCTGTGGAAAAACACCATACAGAAGTTGGTCAAATCATCAACAGCTTCTTTGAAGAATACG
TTGAAGCAACTCTTATCCAACCAACCTTTGTCTATGGTCACCCAGTAGCCGTATCTCCACTGGCTAAGAAAAACGATGAA
GACCCACGCTTCACAGATCGCTTCGAGCTCTTCATCATGACCAAGGAATACGGAAATGCCTTTACAGAATTGAACGACCC
AATCGACCAATTGGAACGCTTTGAAGCCCAAGCCAAGGCTAAAGAACTCGGTGACGACGAAGCGACAGGCGTTGACTACG
ACTACATCGAAGCCCTCGAATACGGTATGCCACCAACAGGTGGACTTGGAATCGGTATCGACCGCCTCTGCATGCTCTTG
ACAGATACAACTACTATTCGGGATGTGTTGCTATTCCCGACAATGAAGCCCTTGGACAACTAA

Protein sequence :
MSTEHFEELNDQQIVRREKMTALAEQGIDPFGKRFERSANSAELKAQYEDKSKEDLEELGQTAIIAGRIMTKRGKGKAGF
AHIQDREGQIQIYVRKDDVSEENYEIFKKADLGDFIGVEGDVFKTNVGELSIHARKLTHLSKALRPLPEKFHGLTDIETR
YRKRYLDLITNRESFDRFVTRSKIISEIRRYLDGLGFLEVETPVLHNEAGGAAARPFITHHNAQNIDMVLRIATELHLKR
LIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADYQDIMDLTEGIIQHTAKAVVGDGPVTYQGTEIAIHEPFKR
IHMVDAIKEQTGVDFWQEMSFEEAKALAAEHKVPVEKHHTEVGQIINSFFEEYVEATLIQPTFVYGHPVAVSPLAKKNDE
DPRFTDRFELFIMTKEYGNAFTELNDPIDQLERFEAQAKAKELGDDEATGVDYDYIEALEYGMPPTGGLGIGIDRLCMLL
TDTTTIRDVLLFPTMKPLDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-111 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSGZ1_0509 YP_006073916.1 Lysyl-tRNA synthetase, class-2 VFG1668 Protein 1e-111 48