Gene Information

Name : SSU12_2000 (SSU12_2000)
Accession : YP_006079423.1
Strain : Streptococcus suis SS12
Genome accession: NC_017619
Putative virulence/resistance : Resistance
Product : putative amino acid ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1984561 - 1985307 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
ATGATTCAAGCAAATGGAGTAAAGCTGACCTTCGGTGGTCAGCAGGTGTTAAAAGGGATTGATGTAGAGGTCAATCCAGG
TGAGGTGGTCGTCATTTTAGGCCCGTCTGGATCGGGAAAAACGACTCTTCTTCGTTCTTTAAACTTTTTGGAAAAAGCTG
ACGCGGGTCACTTAGTCTTCGGTGAGGACAGCTATGACCTGGCTCAGATGACCAAGAAGGAAATTGCAGGCATTCGCAAG
CGCACAGCCTTCGTTTTTCAAAACTATAATCTCTTTGCCAACAAGACTGCCTTACAAAATGTGACGGAAGGCCTGATTGT
GGCTCGGAAAGTACCCAAACAAGAGGCTGAAAGAATCGGTAAAGCAGCCTTGGACAAGGTGGGACTATCTGATAAATATG
GTTTCTATCCAAGTCAGCTGTCCGGTGGTCAGCAGCAACGGGTCGGCATTGCCAGAGCCATTGCGACCAATCCCGAGGTC
ATCTATTTTGATGAACCAACCTCGGCCTTGGATCCTGAGTTAATCGGTGAAGTCCTGGCTGTCATGATGCAGTTGGCAAA
AGAAGGTATGACCATGGTGGTTGTGACTCATGAAATGGGCTTTGCGCGTGCGGTAGCTGATCGAGTCATATTTATGGATG
GTGGTCGGATTATCGAAGAAGGTCGACCAGAAGACATTTTTGACCAGCCAAAAGAAGAACGTACTAAGCAATTCTTAGCT
CGCATTCAAAAGGTAGATGTTGAGTAA

Protein sequence :
MIQANGVKLTFGGQQVLKGIDVEVNPGEVVVILGPSGSGKTTLLRSLNFLEKADAGHLVFGEDSYDLAQMTKKEIAGIRK
RTAFVFQNYNLFANKTALQNVTEGLIVARKVPKQEAERIGKAALDKVGLSDKYGFYPSQLSGGQQQRVGIARAIATNPEV
IYFDEPTSALDPELIGEVLAVMMQLAKEGMTMVVVTHEMGFARAVADRVIFMDGGRIIEEGRPEDIFDQPKEERTKQFLA
RIQKVDVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSU12_2000 YP_006079423.1 putative amino acid ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-29 41