Gene Information

Name : SSUD12_0571 (SSUD12_0571)
Accession : YP_006082142.1
Strain : Streptococcus suis D12
Genome accession: NC_017621
Putative virulence/resistance : Resistance
Product : peptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 574277 - 574978 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCTACATTCAAGTAAAGAATTCTTCGAAATATTATCAGATGGGGGATGCGACCATTGTGGCAAATGACGGTGTGTC
CTTTGAGATTGAAAAGGGAGAGCTGGTCATCATTCTGGGTTCATCTGGTGCTGGAAAATCCACTCTGCTCAATATCTTAG
GTGGCATGGATAGCAATGATGAGGGGGAGGTTTGGATTGACGGTGTGGATATTGCCAAGCTTTCCAGTCATGAACTGACC
AATTATCGTAGAGATGATGTAGGTTTTGTCTTTCAATTTTATAACTTGGTTGCCAATCTGACCGCCAAGGAAAATGTGGA
ACTGGCTGCTGAAATCGTCAAGGATGCCTTGGATGCCGAAGAGGTCTTGGAACAAGTTGGACTAGGCCATCGTATCAATA
ATTTCCCTGCTCAGCTTTCAGGTGGCGAGCAGCAACGGGTTGCCATTGCCCGTGCGGTTGCCAAAAAGCCTAAAATTTTG
CTTTGCGATGAACCAACTGGCGCTCTGGATTACCAAACAGGTAAGCAGGTCTTGCAAATCCTACAAGATATGTCACGCAA
GCAGGGGGTGACGGTGATTATCGTGACCCACAATAGTTCCCTAGCCCCTATTGCAGACAGGGTCATTCGGATGCGGGACG
CCCGTGTACACTCCGTTGAGTTACACGCAGAACCACAGGATATTGCAAGCCTAGAATATTAG

Protein sequence : 
MSYIQVKNSSKYYQMGDATIVANDGVSFEIEKGELVIILGSSGAGKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELT
NYRRDDVGFVFQFYNLVANLTAKENVELAAEIVKDALDAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
LCDEPTGALDYQTGKQVLQILQDMSRKQGVTVIIVTHNSSLAPIADRVIRMRDARVHSVELHAEPQDIASLEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUD12_0571 YP_006082142.1 peptide ABC transporter ATPase NC_012469.1.7685735. Protein 1e-86 78
SSUD12_0571 YP_006082142.1 peptide ABC transporter ATPase CP001581.1.gene598.p Protein 2e-40 43
SSUD12_0571 YP_006082142.1 peptide ABC transporter ATPase NC_012469.1.7686878. Protein 9e-37 43
SSUD12_0571 YP_006082142.1 peptide ABC transporter ATPase CP001581.1.gene798.p Protein 3e-39 42
SSUD12_0571 YP_006082142.1 peptide ABC transporter ATPase NC_008702.1.4606598. Protein 4e-33 42