Gene Information

Name : EcDH1_0156 (EcDH1_0156)
Accession : YP_006090139.1
Strain : Escherichia coli DH1
Genome accession: NC_017625
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 163502 - 163714 bp
Length : 213 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cko:CKO_05012 major cold shock protein

DNA sequence :
ATGTCCGGTAAAATGACTGGTATCGTAAAATGGTTCAACGCTGACAAAGGCTTCGGCTTCATCACTCCTGACGATGGCTC
TAAAGATGTGTTCGTACACTTCTCTGCTATCCAGAACGATGGTTACAAATCTCTGGACGAAGGTCAGAAAGTGTCCTTCA
CCATCGAAAGCGGCGCTAAAGGCCCGGCAGCTGGTAACGTAACCAGCCTGTAA

Protein sequence :
MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-20 72
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 6e-09 48