Name : EcDH1_3707 (EcDH1_3707) Accession : YP_006093604.1 Strain : Escherichia coli DH1 Genome accession: NC_017625 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : - COG ID : - EC number : - Position : 3995570 - 3996091 bp Length : 522 bp Strand : + Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ssn:SSON_4465 RNA polymerase sigma factor FecI DNA sequence : ATGTCTGACCGCGCCACTACCACAGCTTCCTTAACGTTCGAGTCGCTTTATGGCACACATCACGGCTGGTTGAAAAGCTG GCTGACGCGCAAACTCCAGTCTGCTTTTGATGCAGATGACATTGCCCAGGACACTTTTTTGCGGGTAATGGTCAGCGAAA CGCTCTCGACGATCCGCGATCCTCGCTCCTTCCTCTGCACTATCGCCAAACGCGTGATGGTGGACCTGTTTCGCCGAAAC GCGCTGGAAAAAGCGTATCTGGAGATGCTGGCGCTTATGCCGGAGGGGGGAGCGCCTTCACCTGAGGAACGCGAAAGCCA ACTCGAGACCCTACAACTCCTCGACAGCATGCTGGACGGGCTAAACGGCAAAACACGTGAAGCGTTTCTGCTTTCGCAAC TGGATGGTCTGACATACAGCGAGATTGCGCACAAACTCGGTGTTTCCATCAGCTCCGTGAAAAAATACGTGGCGAAAGCC GTCGAGCACTGCCTGCTGTTCCGTCTGGAGTATGGGTTATGA Protein sequence : MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRN ALEKAYLEMLALMPEGGAPSPEERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA VEHCLLFRLEYGL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 5e-77 | 100 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
EcDH1_3707 | YP_006093604.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 2e-77 | 100 |