Gene Information

Name : gspL (EC042_3243)
Accession : YP_006097536.1
Strain : Escherichia coli 042
Genome accession: NC_017626
Putative virulence/resistance : Virulence
Product : type II secretion system protein L
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3460175 - 3461353 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence :
GTGAGTTCCATGCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGATCCCATCCGTTGGCAGCGCCATACACCCGACGTGGA
GCACGGTATCTGGCCTGACGTTGCTGACGAACGTCTCCAGCAATGGCTGCAAACTGATGCGATTCGACTCTACATTCCCG
GCGAATGGATCAGCGTCTGGCAGGTTGAACTGCCTGATGTGCCCCGCAAGCAGATACCGACGATTCTGCCCGCCTTGCTG
GAAGAAGAGCTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCGACCAGCAACTGGCAACCGTAGCTGT
GATTCACCAGCAGCATATGCGCAACATTGCGCAGTGGTTGCAGGCAAACGGCATCACCCGCGCTACCGTCGCGCCGGACT
GGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGC
GCCGGGCGGGCGCTGGCTCCGGTCATGTTCCGCGCACAGCTCAATGAGCAGAATTTACCGATTTCACTAACTGTGGTCGG
CATTGCACCGGAAGAACTGTCTGCATGGGCTGGTGCAGACGCCGAACGCCTGACCGTTACGGCTCTGCCCGCCATTACCA
CTTATGGCGAACCGGAAGGGAACCTGCTAACAGGGCCGTGGCAGCCTCGTGTCAGCTACCGAAAACAGTGGGCGCGCTGG
CGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAACGGGGCGTGACGTTATGGAGCGTCAGCGA
ACAGGTGGCGCAAAGCCGCACCCAGGCGGAGAAACAGTTCTTAACGCTATTCCCGGAGCAGAAGCGGATTGTGAATTTAC
GCTCGCAGGTGACGATGGCGCTGAAAAAATATCGCCCACTGGCCGACGATACCCGGCTGCTCGCAGAATTGTCAGCGATC
GCCAGTACCCTGAAATCAGCGTCACTTACCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGACGCTTCA
CCTCCAACTGCGGACTGCGAACTTTGCCAGCTTCGACAAACTGCGTAGCGCACTGGCAACCGATTATGTTGTGCAACAGG
ACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA

Protein sequence :
MSSMLEIFFPLCAADPIRWQRHTPDVEHGIWPDVADERLQQWLQTDAIRLYIPGEWISVWQVELPDVPRKQIPTILPALL
EEELNQDIDELHFAPLKIDQQLATVAVIHQQHMRNIAQWLQANGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS
AGRALAPVMFRAQLNEQNLPISLTVVGIAPEELSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARW
RVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEKQFLTLFPEQKRIVNLRSQVTMALKKYRPLADDTRLLAELSAI
ASTLKSASLTDIEMRGFTFDQKRQTLHLQLRTANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 2e-120 98
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 3e-166 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspL YP_006097536.1 type II secretion system protein L VFG2055 Protein 1e-118 97