Gene Information

Name : ECOK1_1109 (ECOK1_1109)
Accession : YP_006100317.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Virulence
Product : IroD protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1154551 - 1155780 bp
Length : 1230 bp
Strand : -
Note : identified by match to protein family HMM PF00756

DNA sequence :
ATGCTGAACATGCAACAACATCCCTCTGCTATCGCCAGCCTGCGCAACCAACTGGCAGCGGGCCACATTGCTAACCTTAC
TGACTTCTGGCGCGAAGCTGAGTCGCTGAATGTTCCTCTTGTGACGCCAGTCGAAGGAGCGGAAGATGAGCGAGAAGTGA
CCTTTCTGTGGCGCGCCCGACATCCTCTGCAGGGCGTTTATCTGCGTCTGAACCGGGTGACGGATAAAGAGCACGTAGAA
AAAGGAATGATGAGCGCCCTTCCCGAAACGGATATCTGGACACTGACACTGCGTTTACCCGCAAGTTACTGCGGCTCCTA
TTCGCTGCTGGAAATCCCCCCCGGCACTACGGCTGAGACGATTGCACTGTCCGGAGGCCGTTTTGCCACCCTCGCCGGAA
AGGCCGATCCGCTAAACAAAATGCCGGAGATCAACGTTCGGGGAAACGCAAAGGAATCAGTGCTGACACTTGATAAAGCT
CCCGCCCTGTCGGAATGGAACGGCGGCTTCCACACCGGACAACTGCTTACCTCCATGCGCATTATCGCCGGGAAATCTCG
CCAGGTTCGGCTCTATATTCCGGACATTGATATTTCTCAGCCCCTCGGGCTGGTCGTGCTGCCCGATGGTGAAACCTGGT
TTGATCACCTTGGCGTATGCGCGGCAATTGACGCCGCCATAAATAACAGGCGCATCGTGCCCGTGGCTGTACTGGGCATT
GACAACATTAATGAACATGAACGCACTGAGATACTCGGCGGGCGCAGCAAGCTGATAAAGGATATCGCAGGACATCTGCT
GCCGATGATCCGCGCTGAACAACCGCAGCGTCAGTGGGCAGACCGTTCGCGCACAGTGCTGGCCGGGCAGAGCCTCGGCG
GGATCAGTGCGCTAATGGGGGCTCGTTACGCACCGGAAACGTTCGGTCTGGTGCTCAGCCACTCTCCTTCAATGTGGTGG
ACGCCAGAAAGAACCAGTCGACCAGGCTTGTTCAGCGAAACCGATACCTCATGGGTGAGTGAGCATCTGCTTTCTGCCCC
ACCGCAGGGCGTGCGTATCAGCCTGTGCGTGGGATCGCTGGAAGGTTCGACAGTGCCTCACGTTCAGCAACTTCACCAGC
GGCTGATTACCGCTGGCGTCGAAAGCCATTGCGCAATCTACACCGGTGGTCACGATTACGCATGGTGGCGCGGTGCACTG
ATTGACGGGATTGGTTTACTACAGGGTTGA

Protein sequence :
MLNMQQHPSAIASLRNQLAAGHIANLTDFWREAESLNVPLVTPVEGAEDEREVTFLWRARHPLQGVYLRLNRVTDKEHVE
KGMMSALPETDIWTLTLRLPASYCGSYSLLEIPPGTTAETIALSGGRFATLAGKADPLNKMPEINVRGNAKESVLTLDKA
PALSEWNGGFHTGQLLTSMRIIAGKSRQVRLYIPDIDISQPLGLVVLPDGETWFDHLGVCAAIDAAINNRRIVPVAVLGI
DNINEHERTEILGGRSKLIKDIAGHLLPMIRAEQPQRQWADRSRTVLAGQSLGGISALMGARYAPETFGLVLSHSPSMWW
TPERTSRPGLFSETDTSWVSEHLLSAPPQGVRISLCVGSLEGSTVPHVQQLHQRLITAGVESHCAIYTGGHDYAWWRGAL
IDGIGLLQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroD CAC43426.1 IroD protein Virulence PAI III 536 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECOK1_1109 YP_006100317.1 IroD protein VFG1652 Protein 0.0 99