Gene Information

Name : cspD (ECOK1_0882)
Accession : YP_006100104.1
Strain : Escherichia coli IHE3034
Genome accession: NC_017628
Putative virulence/resistance : Unknown
Product : cold shock domain-containing protein CspD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 919827 - 920051 bp
Length : 225 bp
Strand : -
Note : identified by similarity to SP:P0A968; match to protein family HMM PF00313; match to protein family HMM TIGR02381

DNA sequence :
ATGGAAAAGGGTACTGTTAAGTGGTTCAACAATGCCAAAGGGTTTGGTTTCATCTGCCCTGAAGGCGGCGGCGAAGATAT
TTTCGCTCATTATTCCACCATTCAGATGGATGGTTACAGAACGCTAAAAGCTGGACAATCCGTTCAGTTTGATGTCCACC
AGGGGCCAAAAGGCAATCACGCCAGTGTTATTGTGCCCGTCGAAGTAGAAGCGGCAGTCGCATAG

Protein sequence :
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-13 56